Hordeum vulgare subsp. vulgare (domesticated barley): 123426725
Help
Entry
123426725 CDS
T11213
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 27 isoform X1
KO
K11851
ubiquitin carboxyl-terminal hydrolase 30 [EC:
3.4.19.12
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hvg01002
]
123426725
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123426725
04121 Ubiquitin system [BR:
hvg04121
]
123426725
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
123426725
Peptidases and inhibitors [BR:
hvg01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
123426725
Membrane trafficking [BR:
hvg04131
]
Autophagy
Mitophagy
Other mitophagy associated proteins
123426725
Ubiquitin system [BR:
hvg04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
123426725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
Gly-rich_Ago1
Motif
Other DBs
NCBI-GeneID:
123426725
NCBI-ProteinID:
XP_044966533
UniProt:
A0A8I6XA42
LinkDB
All DBs
Position
2H:475636111..475651242
Genome browser
AA seq
535 aa
AA seq
DB search
MGKFEHGNLLLSLSQGHWHGFSLTAVAVGLGIGVAGLCKVLNSSLGVQWLLGKFSSESER
LYYTGGLQNLGNNCFLNVILQALASCDNFVSSLDDLLESDDVLPEEQSERMPLILALSSL
LKDLSTVRDKKIVLNPESVMHALSCYVSHFNLTRQQDASEAFVHLLTSLRDEFSHCYVPY
KSSLADITMFHSKVYKQREGNQPECKRWKQNIFGPFDGTIGSTLSCRNCSSVLSLDFENF
HCLPVSPVPDINGDIINGCSLVDCLKHFTVLEHLDNYRCDHCWHNAAAKYFNLQSEVDEE
KVNKLRTCVDYDSCNCKHIFGPEKTTWSVSSKATKQLAITRCPKILCIHLLRASFSFDGE
LVKRQGHVSFPLLLNLSPFAGGTFTTGQGPGPSAMNVQRYDTPSLHLYRQLYAHMPINMF
PTGGNSSSKATKDQVTNGGVHSLNEENVDVATSSSSSSSSSSRMELYSLSAVVEHYGVCG
GGHYAAYRRVATNPDANVQVRPHCNWVYVSDDHVSQVSEDDVLGAEATLLFYERL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagttcgagcacggcaatctactgctatctcttagccagggacactggcatggt
ttcagtcttacagccgttgctgttgggctggggataggagttgctgggctgtgcaaagtg
ctgaatagcagtttgggcgtacaatggcttctcgggaagttctcttcggaatcggagagg
ctgtactacactggaggcctgcaaaatcttggcaataattgctttctcaatgttattctg
caggcacttgctagctgcgacaattttgtatcctctctagacgatttacttgaaagtgat
gatgtgctacccgaggaacagtctgaaagaatgcctcttatccttgctttaagttccctt
ttaaaagacttgagcacagttcgagataagaaaattgtattgaatccagaaagcgtaatg
catgctttgagctgctatgttagtcacttcaatttgaccagacagcaggatgcttctgaa
gcttttgttcatctattgacatcactgagggatgaattttcccattgctatgtaccatat
aagagttctctggcagacattaccatgttccactccaaagtatacaagcaaagggaaggt
aaccaacctgaatgcaagcgctggaaacaaaacatatttggtccctttgatgggactatt
ggcagcacattatcttgcagaaattgttcatctgtgctgtcattggacttcgagaatttt
cactgcttgcccgtctctcccgtgcctgatataaatggagatattattaatgggtgtagt
ttggtggattgcctgaagcatttcactgtattggagcatcttgataattaccgttgtgat
cattgttggcataatgctgctgccaaatatttcaaccttcaatcagaagttgacgaggaa
aaagttaacaaactgcgcacctgtgtcgactatgacagttgcaattgcaagcatatattt
ggtccagagaaaacaacatggtcagtatcttcgaaagctacaaagcagttggctatcact
cgttgtccgaagatcttgtgcattcatttgttacgcgcttcttttagttttgatggtgaa
cttgtaaagcgtcagggacatgtttcttttcctttacttctcaatctatccccatttgcc
ggaggcacattcaccactggacagggacctggaccttcagctatgaacgtgcaaagatat
gacacaccttctctccatttatatcggcaactatatgcacacatgcccattaatatgttt
cctactggtgggaactcatcaagcaaggcaactaaggatcaagtaacaaatggtggtgtc
cactcacttaatgaggaaaatgttgatgtggctacgagttcttcatcatcatcatcgtcc
tcatcaaggatggagctatatagtctatcagctgttgttgagcactatggtgtatgcgga
ggtgggcattatgcagcttaccggagagtggcgacaaatcctgatgctaatgttcaagta
cgacctcattgcaactgggtttacgtttcagacgatcatgtatcacaagtgtcagaggac
gatgttttgggtgcagaagcaaccctccttttctacgaaaggctgtag
DBGET
integrated database retrieval system
