Hordeum vulgare subsp. vulgare (domesticated barley): 123426959
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Entry
123426959 CDS
T11213
Name
(RefSeq) uncharacterized protein LOC123426959
KO
K14827
pre-rRNA-processing protein IPI1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
123426959
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123426959
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
Pre-60S particles
5-FMC complex
123426959
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Paralog
GFIT
Motif
Pfam:
TPR_TEX10
TOR1L1_N
Ipi1_N
HEAT_GCN1
HEAT_MROH2B_C
Motif
Other DBs
NCBI-GeneID:
123426959
NCBI-ProteinID:
XP_044966815
UniProt:
A0A8I6XEV0
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Position
2H:complement(517706709..517717173)
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AA seq
894 aa
AA seq
DB search
MGRPAGGASASKKPKAKSKPKQRGGVDFKKYKHKVGRKLPPPKNATNTEIKSKLIVLPEQ
TMASERSGMAVNKRGLTLRELLQQTVHYNPKVRRAAMNGIKDLVTKHPAELKLHKVAMIE
KLQERICDSDKVVRDSLYSLLQSLVFPSLKEDNAMSTRSTLSLLMANVLNGMTHLSMDIQ
LMAFRFLELVVLNFPSSFPRYAEQAFNNFVAVLSNDRIHLQDKSKLNSVLAGLAHCLSLV
ARVTENDDASDRLVHNRPMGELWKPTLDEDNPESGAFATSAVLMKLQNLIRILINSIEVS
ASEICAKPANDAQSSEALLSALHCLHLICTTFIHEAKKSQMEFGRSKSQFGPDWLNSSVL
VCLKKLWGVKRLFYEKGDDRFFVFNLKIAELFLCLSTCVDDTLFPAEELCQFVSSLFAKA
KVLRNKDLMETHLSPLITCIPGLIANCADDSKGYLLEAFTDAFRDSKVDCKLMLPYLEAV
GEMLLPEKSGIWFTEIDLGLLEYRSAWIGELPGILLQSVDKAPPVTKVVLELLLKIGQYF
PTAEIGNLRPFILLFGTKSSSGTVEVGPFVSLPHDCQELVISCLYYFSSLLPDTIEPLAC
CCLSDKLEPLMLIRIIEVLQSTYKAGNLQITEQLSFLSLLMARFDVNCGMSCTLEDAEKV
SNWKTFKALNHLILTCLSEMGDGSLVLELMWNNLSNEIARKPSLHNMNGLFRIIVTLDAA
TNKLMNEDFIKLIAGYLVDAALDLSKTIEVGFQSNKTRLFQYFIKPCIIIFEQNDKVLCC
ALEMLKSFAAGDEHMFSSLSSLDYPRELSQRVCVVTTILVFLFNDRRLHPNLSLSKTAIK
GILHYIRHQLDSNVPDVTYGQKQKLKFAFEQLKTKALQLNCWDRSELEGLSSTT
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atggggcgaccagcgggcggcgcctcggcgtcgaagaagcccaaggccaagtccaagccg
aaacagcgcggcggcgtcgacttcaagaagtacaagcacaaggtagggcgcaagctcccg
ccgcccaagaacgccaccaacacggagatcaagtccaaattgatcgtgttgccagagcag
accatggcgtcggagaggtcgggcatggcggtgaacaagcgcgggctcacgctgcgggag
ctcctgcagcagacggtgcactacaatcccaaagtgcggcgagctgcaatgaatggaata
aaggatcttgtcaccaagcatccagcagagcttaaactgcacaaggttgctatgattgag
aagctgcaggaacggatatgcgacagtgacaaggtggttcgtgactcgttgtacagttta
ctgcagtctcttgtattcccatctttgaaagaggacaatgcaatgtctacccgcagtaca
ctatctctgttgatggcaaatgttttgaatggaatgacacacctatctatggatatccag
ttaatggctttcaggtttttggagctcgtggtcctcaatttcccatcctcttttcccaga
tatgccgaacaggctttcaacaacttcgttgctgtactgagcaacgacagaatccatcta
caggataagagtaaacttaatagtgtccttgccgggcttgctcactgtctttccttggtt
gctcgtgtgacggaaaatgatgatgcatcagatcgactggttcataaccgccctatggga
gaactttggaaacctacccttgacgaagataaccctgaaagtggagcattcgcgacatct
gctgtactaatgaaacttcagaacctcatccgaattctcattaattcaatagaggtttca
gcttcagaaatctgtgcaaagccagctaatgatgctcagtcaagtgaagcgttattatca
gcccttcattgtctgcatctaatatgtacaacatttattcacgaggcaaagaaatctcag
atggaatttggtagatcaaaatcccagtttgggcctgattggctgaatagttctgtgttg
gtatgtctaaagaaattatggggagtgaaacggttattttatgagaagggagatgacaga
tttttcgtcttcaatctgaaaattgctgaactctttttgtgcttgagcacatgtgtggat
gatacattgtttccagctgaggagttatgccagtttgtatcttctttatttgcaaaggca
aaagtacttcgtaacaaggatctcatggaaacgcatttgagtccacttataacttgtata
ccgggtcttatagccaattgtgcagatgactcaaaaggatatttgttggaggcatttaca
gatgcatttagagattccaaggtggattgcaagctaatgttgccatatttggaagcagtg
ggagaaatgctacttcctgagaaatcagggatatggtttactgaaattgatttaggctta
ttggaatatcgtagcgcttggataggcgagcttcctggaatattactacaatcagttgat
aaagctcccccagttacaaaggttgttttggagcttctcctaaaaatcggacagtatttc
cccacagctgagattggaaacctgcgtcccttcatactgttatttggcactaaatcatca
tctggaacggtagaggttgggccttttgttagccttccacatgattgccaagaacttgtc
atttcatgcctttattacttctccagtctgcttcctgacacaatcgagccattggcctgt
tgttgcttaagtgataagctggagcccctcatgttaattaggattattgaagttctacaa
tcaacatacaaggctgggaatctacagataacagagcaactcagtttcttgtcattatta
atggcacgatttgatgttaattgtggtatgtcctgtactctggaggatgctgaaaaggtc
tcaaattggaagactttcaaggccttgaatcacttaattttgacttgcttatctgagatg
ggtgatggctccttggtccttgaattgatgtggaataatttatctaatgagattgcacga
aaaccatcattgcataacatgaatggtctgtttagaattattgttacactcgatgcagca
acaaataagctcatgaatgaagatttcattaagcttatagctggctacttggtcgatgct
gctctggatttgtcaaaaacaattgaagtgggctttcaatctaacaagacaagattattt
cagtacttcatcaagccctgcataatcatttttgagcagaacgacaaggttctctgctgc
gcattggagatgcttaaatctttcgcagcaggagatgaacatatgttttcatctttatcc
agtttggattacccaagggagctttcacaacgagtttgtgttgtcacaaccatactggtc
ttcttattcaatgaccggaggctccatccaaatctttctttgagcaaaacggctatcaaa
ggcatcctgcattatataaggcatcagctggattctaatgtacctgatgtaacatatgga
caaaagcagaaattgaaatttgcttttgagcaactcaagaccaaagcattgcagttgaac
tgttgggatagaagtgagctggaaggactttcaagcaccacataa
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