Hordeum vulgare subsp. vulgare (domesticated barley): 123427004
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Entry
123427004 CDS
T11213
Name
(RefSeq) protein NBR1 homolog isoform X1
KO
K17987
next to BRCA1 gene 1 protein
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123427004
03029 Mitochondrial biogenesis [BR:
hvg03029
]
123427004
Membrane trafficking [BR:
hvg04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
123427004
Pexophagy
Other pexophagy associated proteins
123427004
Aggrephagy
Cargo receptors
123427004
Xenophagy
123427004
Other autophagy associated proteins
Midbophagy
123427004
Mitochondrial biogenesis [BR:
hvg03029
]
Mitochondrial quality control factors
Mitophagy factors
Other mitophagy factors
123427004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
N_BRCA1_IG
UBA_NBR1_C
ZZ
PB1
Fumerase
Motif
Other DBs
NCBI-GeneID:
123427004
NCBI-ProteinID:
XP_044966867
LinkDB
All DBs
Position
2H:complement(525958147..525963401)
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AA seq
870 aa
AA seq
DB search
MMPQRGAPPSLRGPVPLGRRPRDLVIKVKYGGTLKRFGASVNGSNLDHNLAALRLKIANA
FKFSPDDELILTYTDEDGDVVMLDDDDDLRDAAVSQELNPLRIDVQLKSSSAGAPQPNQQ
VLNSRSKMSAAMEDQLAQVKSAIDEALKFVPEQVPAVLAKLSHELRSKAASSASPVHELL
DCIAKLVTPKSGMQPTRGLSDSSSGSSNGNLQTVRDIKNNHASESATVSASHSQHAKSSG
ALGLKSVLVEKTNAQVQQAPGCTSTGVPSVLVGSGGKLWYHKKRTDALSKGKSHAQSIGK
PVISSSVPPVPSFALGGSTLGSANGYMPFGSVGKINGDSSSAFPPPRGPPISSIPAFETS
PRLPSYCPVPTHGLQKAFPPPPAHDYNQFRFSRPSSVNPYGIYQDPYSFGSYSGYGIPQQ
SIHKWVECDGCGVTPIVGSRFKSTVKHNYDLCCACFYRMGNEAEYTRMDKPLSVSERLRN
LNKDKRFLQLDCRFVKDLTVPDGTRMAPSTPFRKIWSMRNNGTIVWPYGTHLAWVGGDEF
ARQSSVKLAVPEAGFPLDGEIDVYVDFVSPAKPGRYISYWRLTSPDLQKFGQQVWVLIEV
EQPVRASGDNQTAAIDLNLPADSNPTTLRPSIVQRRPLNFLNLPAEGSTATWTTDSASDN
DEDGVSLCDVIATLGRKGSKAVGSVVPPAPAAHEPVHVPMAYPQAEPVQVPIAYPQAEPV
QVPIAYPQAADEPVQAPVVYSQAADEPVQVPVAYPQASSAEALGMPAGVPAPEAAPLMEH
ISMPEPLPAAILDNSHVAPVSMPLPDETINNDMEENLLRELVDMGFRQVDLNKEVLRQNE
YDLQKSVDDLCGFHEWDPLLVELKELGFDD
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atgatgcctcaacggggcgccccgccgtcgctccgcggccccgtgccgctcggccgccgg
ccccgggatctcgtcatcaaggtcaaatatggcggcactctcaagcggttcggtgcttct
gtgaatggttcaaacttggatcataatcttgctgcccttcggttgaagattgcaaatgct
tttaagttcagtcctgatgatgaattgattctcacatatactgatgaggatggagatgtt
gtcatgctggatgatgatgatgatttacgtgatgcagctgttagtcaggagctgaaccct
cttaggattgatgtccagttgaaaagcagcagtgctggggcacctcagcctaaccagcag
gtattgaattcccggtctaagatgtctgcagctatggaagatcaactagctcaggtgaaa
tcagctattgatgaagcgttgaagtttgtaccagagcaagttcctgctgtccttgctaaa
ctatcgcatgagctgcgctctaaagctgcatcatcggcatcaccggtgcatgagttgctg
gattgtattgctaaactggtaacacccaagagcggtatgcaacctaccaggggtctctct
gatagttcgtctggctcctctaatggtaatctacaaacagtgagagacataaaaaataat
catgcatctgaatctgcaacagtttcagcttcacattcgcaacatgctaaatcatctgga
gcacttggtcttaagagtgtgctagttgagaagaccaatgctcaagttcaacaagcacca
ggctgtacgtcaactggggttccatctgttttagttggttctggtggaaaactctggtat
cataagaaaagaactgatgccctgagtaaggggaaatcacatgcccaaagtattgggaaa
cctgtcatatcttcttccgtgccacctgttccttcatttgctcttggtggctctactctt
ggttctgctaatgggtatatgccctttgggtctgtcggaaagatcaacggtgattcaagt
tcagccttccctccccccagaggccctccgattagttcaattccagcctttgaaactagc
cctagacttccctcttattgtccagttccaacccatggtttgcagaaggcattccctcct
ccacctgcacatgactacaatcagttcaggttcagtaggccttcatcagttaatccatat
ggaatttatcaagatccctactcatttggttcatacagtgggtatggtatcccacagcag
tcgattcataaatgggtagaatgtgatggctgcggggtgacaccgattgttgggtctcgc
ttcaagtccaccgtcaaacataactatgatctatgctgtgcttgtttctatcgcatgggc
aatgaggctgaatataccagaatggacaagccgctctcagtaagtgaaagattgagaaac
ctgaataaggataagaggttcctccaacttgactgccgttttgtcaaggatctcactgtc
cctgatggaacacgaatggctccatcaactccatttcgtaagatttggtccatgcggaac
aatggaactatcgtatggccttatggaacccaccttgcctgggttggtggagatgaattt
gctcgccaaagctcagtgaaattagcggttccagaggctggtttccccttagatggagaa
attgatgtttatgttgactttgtttcacctgcgaaacctggtaggtacatatcgtactgg
agactaacatcgccggacctacagaaatttggtcaacaagtttgggttcttatcgaggtg
gaacagcctgtaagagccagtggtgacaaccaaactgctgcaatagacttgaacttgcct
gcagacagcaaccccacaacattgaggccttccattgtgcagcgccgccctctgaacttc
ttgaacttgcctgcagaaggcagcactgcaacctggaccacagattctgcatctgacaat
gacgaggacggcgtatctctgtgtgatgtgattgccacgctgggacgaaagggatccaaa
gcggttggaagtgttgtgccccctgcaccggcagcacatgaaccagttcatgtacccatg
gcttatccccaggcagaaccagttcaagtgcccatcgcttatccccaggcagaaccagtt
caagtgcccatcgcttatccccaggcagcagatgaaccagttcaagcaccagtcgtttat
tcccaggcagcagatgaaccagttcaagtacccgttgcttatccccaggcctcatctgct
gaagctctagggatgcctgctggtgtgcctgcacctgaagccgcaccactgatggaacac
atcagtatgccagaacctctacctgcagctattcttgacaattcacatgttgctcctgtt
agcatgcctttgcctgatgaaaccatcaacaacgacatggaggagaaccttctgagggaa
ctggtggacatgggcttcaggcaggttgacctgaacaaggaggtgcttcggcagaatgag
tatgatctccagaagtcggtggatgacctgtgcggcttccatgaatgggatccgctcctt
gtggagctgaaggaactgggttttgatgattga
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