Hordeum vulgare subsp. vulgare (domesticated barley): 123427369
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Entry
123427369 CDS
T11213
Name
(RefSeq) autophagy-related protein 13a-like
KO
K08331
autophagy-related protein 13
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
123427369
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123427369
03029 Mitochondrial biogenesis [BR:
hvg03029
]
123427369
Membrane trafficking [BR:
hvg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
123427369
Atg1 complex
123427369
Mitochondrial biogenesis [BR:
hvg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
123427369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
123427369
NCBI-ProteinID:
XP_044967326
UniProt:
A0A8I6WR57
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Position
2H:complement(570402948..570411470)
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AA seq
523 aa
AA seq
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MSSMSDSGGGGRAGAELMAEQFHLKVLHAVLAVRAPRPLAAPAPAAASASFRRRDRWFHL
PLHDPPPPPSAECLEAPPPGEPLVVDIHLSPAGCGGAGGEVVERWTVACEPWPDAAASGE
GMAVNRAYKRCMTLLRSVYATLRLLPAYRVFRLLCANQSYNYEMGYTVGSFAVPFSRAQE
SAMRSHRFVPVDTQPGRLVVSVQYLSSLAAFNLEISSLSPSMLITNYVGSPAAEPMRNFP
SSLTEATGCAFPQSYQQQRPHSWAPPALWPLAPAQQTRFSPPPLHYASPTPSPPNFPGGY
LQSPLRGESAPVTIPGVRRSPVHRQSMLDPVKGLMLPPPSPRRGDKGAAGSQESPSDISR
SFGRPEGLRMGDPYGSSSPGSKGKDSRDESGRFSALSSCDSPRQDDLDEADYPFAVDDVD
PPISRPGSSDGKEAGDQAGSSSHKSQDAAVGSLVHLLRTARPLRDSSYSSQTSGAESNTV
ASTSSVMSRRTSDALEELQSFKAIRERLLSGSRAKERDSPEKP
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcatgtcggactctgggggcggcggccgcgcgggcgcggagctgatggcggag
cagttccacctcaaggtgctgcacgccgtcctcgccgtgcgcgcgccgaggccgctcgcc
gcgccggcgccggcggccgcctcggcgtccttccgccggcgcgacaggtggttccacctc
ccgctccacgacccgccgccgcccccctccgccgagtgcctggaggcgccgccccccggg
gagccgctcgtcgttgacatccacctgtcccccgccggctgcgggggagcgggcggggag
gtggtggagaggtggacggtcgcgtgcgagccctggccggacgccgcggcgtccggcgag
ggtatggccgtgaaccgggcgtacaagcggtgcatgaccctgctgaggtcggtgtacgcc
acgctccgcctgctccccgcgtaccgcgtcttccgtctcctctgcgctaaccagtcgtac
aactacgagatgggctacaccgtcggctccttcgccgtgcctttctcgcgcgcccaggag
tctgccatgcgttcccatcgcttcgttcccgttgacacccagcccggccgtctcgtcgtc
tccgtccagtacctgtccagcctcgccgcgttcaacctggagatctcctccctctccccc
tctatgttgatcaccaactacgtcggcagccctgcagctgagcccatgcgcaacttccct
tcttcgctcacggaggccacaggctgcgctttcccgcagtcctatcagcagcagcgtccg
cacagctgggcgccgcctgcgctctggccgctcgccccagcgcagcagacgagattttcg
ccaccgccgttgcactatgcgtcaccaacaccgtcgccccctaattttcctggtgggtac
ctgcagtcccctctgaggggggagtctgcaccggtgaccataccaggcgtgagaaggagc
cccgtgcaccgtcagagcatgctggacccggttaaaggtttaatgctgccaccgccatcc
ccgaggagaggagacaagggagcagcaggttcacaagaatcgccgtcagatataagccgg
tcattcgggaggccagaaggacttaggatgggggatccatatggcagctcatcaccagga
tccaagggtaaggacagtcgggatgaatctggcagattctctgcactctcttcttgtgat
tcaccacggcaagatgatctggatgaggcagattatccttttgctgtggatgatgtcgat
ccaccaatctccagacctgggagcagtgatggaaaggaggctggagatcaggcaggctcg
tcgtcccataaatcacaagatgcggcagtcggctctctggttcacttgctgagaaccgca
cgcccgctgcgagattctagctattcgtctcaaacgtcaggtgctgagtctaacacagta
gcctcgactagttctgtcatgtctcgcaggacatctgatgcactcgaggagctgcagtct
ttcaaagcaatcagggagagactgctgtccgggagtagagcgaaagagcgagactcgccg
gagaagccatag
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