Hordeum vulgare subsp. vulgare (domesticated barley): 123427474
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Entry
123427474 CDS
T11213
Name
(RefSeq) homeobox-leucine zipper protein ROC4-like
KO
K09338
homeobox-leucine zipper protein
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123427474
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
123427474
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
ZapB
KilB
Motif
Other DBs
NCBI-GeneID:
123427474
NCBI-ProteinID:
XP_044967463
UniProt:
A0A8I7B7Q6
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Position
2H:586866400..586872722
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AA seq
780 aa
AA seq
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MPTEKGMAAFWGFLQDDGGGPAPDMNEFPYYSAADLASWPPSSLAPAGAVVKAESGSPSM
IDHLHAVSGADFGGGGGEDDEVAPELGQQRLERKRPPHGRHTPQQIQELQALFNQCPHPD
EKQRAAVGKRVCLRPSQVKFWFQNRRTQIKRESLQHENKQLREENGKLRAENLSLREAMT
RPVCGCCGGPVPAMLEDSPSLEEERLRVQNATLRIELSRSCALASAFLGRSVSSVAAPPT
PGSPVDRIGSVPATTVAHSTVTEFTGSPSSQTVEMAVTTMAKAGIDESVFLELATSAMDE
LVKMAQMDEPLWIPNALLPGSLVKATLNHEEYLKTFSPSIGVKPPGFVSEASRESGIVAS
DGSFELVETLLDERQWSSFFSCIIAESSTIEEISTGAAGSRDGALLLMQAKLQVLSPLVP
IREVTFLRFCKQLGECLWAVVDVSIDGLVMEQGLAVASTAANMKCRRLPSGCVVQEIPNG
FCKVTWVEHTVYDESSIHQLYRPLLRSGLALGAGRWLSTLQRQYECLDVLMPKQDASDAM
LEGSRSLLRLAERMMENFCAGVGASSAEWSKLDDFTGSIGEDVRIMARRSVDEPGVPPGG
VVVCAATSVWMLVTPKRLFNFLCNEGTRAEWDILSRGGSMQEVTKIYKGQLNGNAVSLLK
GTAPNTHQDSSILVLQETCMDASGSMVVYTPVDIPAMRRVMGGEGDPASIMLLPSGFVIL
PSVPGDDGGHKACGSLLTVAFQILGSRQPTGKLTVESVQTVGSLISCTINRIKTALRCDA
NT seq
2343 nt
NT seq
+upstream
nt +downstream
nt
atgcccacggaaaagggaatggccgccttctggggtttcttacaggacgacggcggcgga
cctgcgcccgacatgaacgagttcccctactactccgccgccgacctcgcgtcctggccg
ccttcctccctcgcgccggccggcgccgtcgtgaaggcggagagcgggagcccgtcgatg
atcgaccacctccacgccgtctccggagccgatttcggcggcggcggcggcgaggacgac
gaggtcgcgccggagctcggccagcagcgcctcgagcgcaagaggcccccccacggccgc
cacacgccgcagcagatccaggagctccaggcgttgttcaatcaatgcccccaccccgac
gagaagcagcgggcggcggtgggcaagagggtctgcctccggccgagccaggtcaagttc
tggttccagaaccgccgcacgcagatcaagagggaatcgctgcagcacgagaacaagcag
ttgagggaggagaacggcaagctgcgcgccgagaacttgtccctccgggaggcgatgacg
cgtccggtgtgcggctgctgtggtggcccggtcccggcgatgcttgaggactcgccgtcc
ctggaggaggagcgcctgcgcgtccagaacgccacgctcaggatcgagctcagccgatcc
tgcgccctcgcttccgcgttcctcggcaggtccgtttcttccgtggcggcgccacccacg
ccaggctcgccagtggaccgtattggctcagtgccggcgaccaccgtggcccactcgacg
gtcaccgagttcacgggcagtccctccagccaaacagtggaaatggcggtcacgaccatg
gcgaaggctggcatcgacgagtccgttttcctggagcttgcgacgagtgcaatggatgag
ctcgtcaagatggcgcagatggatgagccgttgtggattccaaatgccctcttgcccggt
tcccttgtcaaggcgacgctcaaccatgaagagtacttgaagaccttctcgccgtccata
ggggtgaagcctccggggtttgtatcagaggcctctagggaatccggcattgtagccagt
gacggcagcttcgagcttgtggagactctgttggatgagagacagtggtccagtttcttc
tcgtgcataatcgccgaatcatcgacaatcgaggagatctctactggagctgcaggaagt
agagatggtgcattgctgcttatgcaggcaaagctgcaggttctttcacctcttgtccct
atcagggaggtcacctttctcaggttctgcaaacagttgggtgagtgtttatgggctgta
gtggatgtttccattgatgggttggtgatggagcaaggccttgccgtggcatccaccgct
gcaaatatgaagtgccggaggctgccttctggctgtgtggtgcaagaaatccccaatggc
ttctgcaaggttacatgggttgaacatacagtatatgacgaatcctccattcaccagctc
taccggcctctccttcgttctggccttgcccttggcgcagggcgttggctttctacgcta
cagcgtcagtatgagtgcttggacgttctcatgccgaagcaagacgcatcagatgccatg
ttggaaggatcacggagcttgctgaggttagcagagaggatgatggagaacttctgtgcg
ggggtgggcgcatcttctgctgaatggagcaaactggatgacttcacggggagcattggg
gaggatgtgcgtatcatggcacgtaggagtgtggatgaaccaggggtgccacctggtggt
gtggtggtgtgtgctgccacatcggtgtggatgcttgtaacacccaaacggcttttcaac
ttcctgtgcaatgagggaacgcgtgctgaatgggacatcctaagcaggggtggctctatg
caggaggtgacaaaaatctacaaggggcaactgaatggcaacgctgtatctctacttaag
ggcactgccccaaacacccaccaggacagcagcattctggtcctacaggagacctgcatg
gatgcatccggctcgatggtggtgtacacccctgtggacatcccggcaatgcgccgtgtc
atgggcggagaaggtgacccggcgtcgatcatgctcctgccatccggtttcgtcattctg
cctagcgtgcctggcgacgacggtgggcacaaggcatgcggctccctgctcaccgtggcg
ttccagatactcgggagcaggcagcccactgggaagctcaccgtggagtcggtgcagacc
gtgggcagcctcatctcctgcaccatcaacaggatcaagacggcgctgcgctgcgacgcc
tga
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