Hordeum vulgare subsp. vulgare (domesticated barley): 123427488
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Entry
123427488 CDS
T11213
Name
(RefSeq) protein indeterminate-domain 4, chloroplastic-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123427488
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123427488
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Gene cluster
GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_6
zf-met
zf-C2H2_jaz
zf-C2H2_4
zf-C2H2_STOP2_C
Motif
Other DBs
NCBI-GeneID:
123427488
NCBI-ProteinID:
XP_044967483
UniProt:
A0A8I6XF18
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Position
2H:complement(588333277..588340155)
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AA seq
614 aa
AA seq
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MASNSSAAAAAAFFGMRDGDQQDQMKPLISQQQHQQHQQHQLAAVALSGAGNAAPAASSQ
GAPAAAPPAKKKRTLPDPDAEVIALSPKTLMATNRFVCEVCNKGFQREQNLQLHRRGHNL
PWKLKQKNPNQVQRRRVYLCPEPTCVHHDPSRALGDLTGIKKHFCRKHGEKKWKCDKCSK
RYAVQSDWKAHSKICGTREYRCDCGTLFSRRDSFITHRAFCDALAQESARLPPTSLSSLT
SHLYGATNAGNMALSLSQVGSHLNTLQHDGHHHHPSPELLRLGGAAGGGSSSIAARLDHL
LSPSGASAFRPPQQQPQSAFFLNAAPGQDFGDDAGNGQHSYLQSKPFHGLMQLPDLQGNG
AGGPASSGHGLFNLGFFSNNGNSSGSSHEHASQGMMSNDQFSGGAGGGGGGGGSEVSAAG
IFGGNFVGGDHISQAGMYNDQAPMLPQMSATALLQKAAQMGATSSPNGAASMFRGFVGSS
PHARQGTPQQQMDQNDANLNELMNSLAAGGGVNAAAMFGGANAGPAGMFDPRMCDMDQHE
VKFSQGGGGVGGNGGGAGGGGGGDMTRDFLGVGGGGIVRGISTPRGDHHQSSSDMSSLEA
EMKSASSFNGGRMP
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgaattcatcggcagcggctgcggcggcgttcttcgggatgagggatggggac
cagcaagaccagatgaagccgctgatatcacagcagcagcaccagcagcaccagcagcac
cagctggcagcggtggcactgtccggcgcgggtaacgcggcgcctgcggcgtcaagccaa
ggcgctccggcggcggcgccaccggccaagaagaagaggactctacctgatccagacgcg
gaggtgatcgcgctgtcgcctaagacgctgatggcgacaaaccggttcgtgtgcgaggtg
tgcaacaaggggttccagcgcgagcagaacctgcagctgcaccgccgcggccacaacctg
ccgtggaagctgaagcagaagaacccgaaccaggtgcagcgccggcgcgtgtacctgtgc
ccggagccgacgtgcgtccaccacgacccgtcccgcgccctgggcgacctcaccggcatc
aagaagcacttctgccgcaagcacggcgagaagaagtggaagtgcgacaagtgctccaag
cgctacgccgtgcagtccgactggaaggcgcactccaagatctgcggcacccgcgagtac
cgctgcgactgcggcaccctcttctcccggagggacagcttcatcacccacagggccttc
tgcgacgccctggctcaggagagcgccaggctgccgccgacgagcctgagtagcctcacc
agccacctctacggggctactaacgctggcaacatggcgctgagcctgtcccaggtggga
tcccacctcaacaccctgcagcacgacggccaccaccaccacccgtccccggagctcctg
cgcctcggtggagcggccggtggaggcagcagcagcatcgccgcgcgcctcgaccacctc
ctgtcgccgtctggcgcgtccgcgttccgtccgcctcagcagcagccccagtcagccttc
ttcctcaacgctgcgccggggcaggattttggcgacgacgcgggcaacgggcaacactcc
tacctgcagtccaagccgttccacggcctcatgcagctcccagacctccagggcaatggt
gcgggagggcccgcctcatcgggccatggactcttcaacctgggcttcttctccaacaat
ggcaatagctcggggtctagtcatgagcatgcaagccaggggatgatgagcaacgaccag
ttcagcggcggagctggaggaggcggcggcggtggtgggtctgaggtatcggcggcgggg
attttcggcgggaactttgttggtggtgatcacatttcgcaggctgggatgtacaacgac
caggcgcccatgctgcctcagatgtcggcgaccgcactgctccagaaggcggcgcagatg
ggcgcgacctccagccccaacggcgcagcgtccatgttccggggcttcgtgggctcttcg
ccgcacgcgcgacaggggacgccgcagcagcagatggaccagaacgacgcgaacctgaac
gagctgatgaactctctggctgctggcggcggcgtcaatgccgctgcgatgtttggcggc
gctaacgccggccccgccgggatgtttgatccgaggatgtgcgacatggatcagcacgag
gtgaaattcagccagggaggaggtggtgttggtggcaacggcggtggtgctggcggcggc
ggcggcggcgacatgacgcgggactttcttggcgtgggcggaggcggcatcgtgcgcggg
atatcgacgccgagaggagaccaccaccagagcagcagcgacatgagctccttggaggcc
gagatgaagtcggcttcgtcctttaacggaggccggatgccatga
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