Hordeum vulgare subsp. vulgare (domesticated barley): 123427633
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Entry
123427633 CDS
T11213
Name
(RefSeq) ribosome maturation protein SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
123427633
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123427633
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
123427633
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
GerD
Motif
Other DBs
NCBI-GeneID:
123427633
NCBI-ProteinID:
XP_044967649
UniProt:
F2D179
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All DBs
Position
2H:601819775..601822640
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AA seq
363 aa
AA seq
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MSRTLVQPVGQKRLTNVAVVRLRKGGQRFEIACFPNKVISWRERVEKDLDEVLQSHTVYS
NVSKGVLAKSKDLIRTFGTDDLTEICLEILEKGELQVSGKEREAQLSSQFRDIATIVMEK
TISTETRHPFTMKMIESIMHEIHFAVDPNLTSKEQALRVIKKLIENPKYKIKRAPLTVRF
IAPKSNLAGLMEKLDGWNAIVLSKDESADQSSVVCEIEPSILHSCEEKLKDVQGRVEVLS
VSARAEGGSSTDQYDNVEDNVEKAQAVPAKESGTVTQLSETMQKQSLSSEVESQGQAPGK
PQKRCKECSIFMEDKLYRDHCKSGWHKHNYTRHKNGLPPLSQEECLMEMEMAESQRGLKD
YDF
NT seq
1092 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcacgctggtgcagccggtggggcagaagcggctgaccaacgtggccgtggtg
cggctgcgcaagggcggccagcggttcgagatcgcctgcttccccaacaaggtcatctcc
tggcgcgagcgcgtcgagaaggacctcgacgaggtgctccagtcccacaccgtctactcc
aacgtctccaagggcgtcctcgccaagtccaaggacctcatcaggaccttcggcaccgac
gacctcaccgaaatctgcctcgagattttggagaaaggggagctccaggtttctggcaag
gagagggaggcgcagctgtcctcccagttccgggacatcgccaccatcgtgatggagaag
actatcagtaccgagacccggcaccccttcaccatgaaaatgatcgagagcatcatgcac
gagatacactttgccgtcgatccaaaccttacctccaaggaacaggcactgagagttatt
aagaaactaattgagaaccctaagtacaagataaagcgtgcaccattgacagtgcggttc
attgcacctaagtccaatcttgctggccttatggagaagcttgatgggtggaatgcaatt
gttctttcaaaggatgaatctgctgatcagtcttccgttgtatgtgagattgaaccatct
attctgcactcttgtgaagagaaactgaaggatgtgcaagggagggtggaagtactctcg
gtgtcggcacgcgcagaaggtggctcttctacagaccaatatgacaatgtggaggacaat
gtggagaaggcacaggccgttcctgcgaaggagtctggtactgtcactcagctaagtgag
accatgcagaaacagagcctttcaagtgaagtggaaagccagggtcaggcaccaggcaag
ccgcagaaaagatgcaaagagtgcagcatattcatggaggacaagctgtacagagaccac
tgcaaatcggggtggcacaagcacaactacacacgccacaagaatgggcttcctccgctc
agccaagaggagtgcttgatggaaatggagatggcagagtcccagaggggtctgaaggac
tatgatttctga
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