KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123427888
Entry
123427888         CDS       T11213                                 
Name
(RefSeq) transducin beta-like protein 3
  KO
K14555  U3 small nucleolar RNA-associated protein 13
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    123427888
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hvg03009]
    123427888
Ribosome biogenesis [BR:hvg03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    123427888
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_WDHD1_1st Utp13 Beta-prop_EML_2 EIF3I WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_Gbeta Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_Aladin Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_WDR41 Beta-prop_IFT122_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_IFT140_1st ANAPC4_WD40 NBCH_WD40 Beta-prop_SPT8 Beta-prop_DCAF12 Beta-prop_HPS5 Beta-prop_Vps41 Beta-prop_WDR19_1st Beta-prop_NWD2_C WD_LRWD1 Beta-prop_IP5PC_F Ge1_WD40 Beta-prop_ACSF4 WDR54 Beta-prop_NUP159_NUP214 Cytochrom_D1 WD40_like Beta-prop_WDR75_2nd Polysacc_lyase-like UTP15_C
Other DBs
NCBI-GeneID: 123427888
NCBI-ProteinID: XP_044967962
UniProt: A0A8I7B3X4
LinkDB
Position
2H:complement(618319952..618326911)
AA seq 881 aa
MALSQGPKKNYRCDRSLQQFYTGGPFAVGSAPRGEGEGDAEAFLACACGSELRVVSAADA
SSIGEPIDGDSEAVTGIALSPDSRLLFAAGHSKLIRVWDLASRTCIRSWKGHDGPVMAMS
CHASGGLLATAGADKKVCVWDVDGGFCTHFFRGHTAVVTTIMFHKDPKRLLLFSGSDDGT
VRVWNLESKKCIAVLNAHFSTVTSLALSEDGLTLLSAGRDKVVNVWDLRKYASKKTIPAY
EMIEGVSFIGPGSGILACLGVEVAKLKEKTDGYFLTVGERGLVRMWCLESAVCVFEQQLS
DVTINSENEESRRGFTATIMLPDDQGILCVTADQQFLFYSCTRTDEGTFQLNLYKRLIGY
NDEILDLKFVGEEEKYLAVATNLEQVRVYDVASMSCSYVLAGHTEIVVCLDTCVSASGKT
LVVTGSKDNTVRLWDMEKRSCIGTGKGHLGAIGCVAFSKKSKNFFVSGSSDRTIKVWTWD
DTLIDAGGEVPLKAKAGVAAHDKDINSLSVSPNDGFVCSGSEDRTASIWKLPNLVSSVVL
KGHKRGIWSVEFSPVEQCVITSSGDKTVKIWHVADGSCLKTFEGHTSSVLRASFLSRGTQ
FVSCGSDGLVKLWTIKTNECIATYDKHDGKVWALAVGKKTEMLATGGTDSDLNLWYDCTL
EDKQEDFLKKEEEVLRGQELENAVSDSDYTRAIQLAFELRRPRRLLELFSQLCRKADPED
PIEKALVGLPKEGLRVLLEYIREWNTKPKFCHVAQFVLFRVLRSLPPTDILEIKGISELL
EGLIPYSQRHFSRVDRLVRSTFLLDYTLTRMSVVDPDVDVGITKDVTNDSSTDNVEIAPA
EPEQETPEKPGKKRKSSKTTPSSKKSSKKVKASSNAVSVEA
NT seq 2646 nt   +upstreamnt  +downstreamnt
atggctctgtcgcaggggcccaagaagaactaccgctgcgaccgctcgctgcagcagttc
tacacgggcgggccgttcgccgtcgggagcgccccccggggcgagggcgagggcgacgcc
gaggcgttcctcgcgtgcgcctgtggcagcgagctgcgcgtggtgtctgccgctgacgcc
tcctccataggggagcccatcgacggcgactccgaggccgtcacggggatcgcgctgtcc
ccggactctcgcctcctcttcgccgctggacacagcaagctcattagggtctgggacctc
gcgtcgcgcacctgcatccgcagctggaagggacatgatggtcctgtcatggccatgtca
tgccatgcttctggtggcttgcttgcaactgctggagcagacaagaaggtttgcgtgtgg
gatgtggatggtggattttgcacacatttctttagaggtcatacagctgttgtgacgacc
ataatgttccacaaagatccaaagcgccttctgttattttcaggaagtgatgatggcaca
gttcgcgtttggaaccttgaaagcaaaaaatgcattgctgtgcttaacgcacatttttca
acagtgacttcgttggcgttatcagaagatgggctaacattgctcagtgcagggagggat
aaggttgtgaatgtgtgggatcttcggaagtatgcctcaaagaagacaataccagcatat
gaaatgatagaaggtgtttccttcattggaccagggagtggcatcttggcttgtttgggt
gtcgaagtggcaaagttgaaggaaaaaacggatggttattttcttacggttggtgaacgt
ggacttgtgcgcatgtggtgcttggaaagtgctgtttgcgtgtttgagcagcagttatct
gatgtaaccatcaactcagaaaacgaggaatctagaaggggctttacagctactattatg
ttgccagatgatcaaggaatcctatgtgtcactgctgatcaacaatttttgttctattct
tgtacaagaactgatgaagggactttccagttgaacctatataaacgtctaataggttat
aatgacgagattcttgatttgaagtttgttggggaagaggaaaaatatcttgccgtggcc
actaacttggagcaggtccgtgtttatgacgttgcatcaatgtcatgttcttatgtgctg
gcgggccatactgaaattgttgtttgccttgatacttgtgtctctgcttctgggaagaca
cttgttgtaactgggagcaaagataatactgtaagattgtgggatatggaaaagagaagc
tgtattggtactggtaaaggccatctaggagctattggttgtgttgctttctcaaagaag
tcgaagaacttctttgttagtggcagcagtgaccgaaccatcaaggtttggacctgggat
gatacactcattgatgctggcggtgaagttcctctcaaagcaaaggctggtgtagctgca
catgataaagatattaattctctctctgtctcacctaatgacggctttgtttgcagtggt
tctgaggaccgaactgcaagcatatggaaactccctaacctagtgtcctctgttgtcctt
aaagggcataaaaggggcatttggtcagttgagttttctcctgttgaacagtgtgtcata
acatcatctggcgacaaaactgtcaaaatatggcatgttgctgatggctcatgcctgaag
acatttgagggtcatacgtcaagtgttttgagagcttcattcctttcacgtggaactcag
tttgtttcttgtggaagcgatggtctagtgaagctatggacgataaaaacgaatgagtgc
attgctacatatgacaagcacgatgggaaggtttgggcactggctgttggcaagaaaact
gaaatgcttgctactggtggaactgattctgatcttaacctttggtatgattgcacgttg
gaagataagcaggaggatttccttaagaaggaggaggaagttttaagaggccaggaattg
gaaaatgcagtgtcagattctgactatacaagagcaatacaactcgcatttgagcttaga
agaccacgcaggcttcttgagttattctcacaactttgcaggaaagctgatccagaggac
cctatagaaaaagcccttgttggtctcccaaaggaagggcttcgcgtgcttcttgagtat
atacgtgaatggaatacaaagcccaagttttgtcatgttgcacagtttgtgctttttcgg
gtgttgcggagcttgcctcccactgatatcctggagataaaaggcatcagtgagctcctc
gagggcctcatcccatattcgcaaaggcacttcagcagagtcgacagacttgtacgcagc
acatttttgctggactacacgttgacacggatgtctgtcgtagacccagacgtagacgtg
ggcataaccaaagatgttacaaacgactcgtcaacggacaatgttgagattgcgccagca
gagcctgaacaagagaccccggagaagccgggcaagaagagaaaatccagcaaaacaacc
ccatcaagcaagaaaagtagtaagaaggtgaaggcttcttcgaacgctgtttctgtcgag
gcgtaa

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