Hordeum vulgare subsp. vulgare (domesticated barley): 123427959
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Entry
123427959 CDS
T11213
Name
(RefSeq) protein SDA1 homolog
KO
K14856
protein SDA1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123427959
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123427959
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SDA1_HEAT
SDA1_C
SDA1_dom
Motif
Other DBs
NCBI-GeneID:
123427959
NCBI-ProteinID:
XP_044968041
UniProt:
A0A8I6X0S5
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All DBs
Position
2H:621995328..622002649
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AA seq
826 aa
AA seq
DB search
MRQHAPAYTPEAASASATGGAGERHSLPALQAKMKRDPEGYETELRQLQRHFESSVFLFR
QQSALSSSSSGGGGGGETAKELGDLALFLAHVAPFYPNDLADLPDQIGGLLDTNARALPS
GLRVHLVQALILLVNRKIVDLEDTMELFMELQVIGDRAVKKLAFSHIVHSIRRMNQKHKN
EAKNRKLQGILFKLVQGEEESRAKRAFTILCDLHRRRVWFDDRTANAICDACFHPSSRLM
TSAISLLIGYENVEQEDDSDASSEDEAIQNPNIILSKEDVYKANHKGTSASKKKKKAKLE
RVVRSMKRQQRKSNEETGSNYYSPLTYLKDPQGFAEKLFSRLQKCNERFEVRMMMLKVIA
RTIGLHHLVLLNFYPYLQRYVQPHQRDVTTLLAAAVQACHEMVPPDAVEPLFKQIVNQFV
HDRSRPEAIAVGLNVVREICMRIPLMMNEDLLQDLVLYKKSHEKAVSIAARSLITLFREI
CPSLLVKKDRGRPIDPTARPKAFGETTIASDVPGAELLDEEMSLEGGSDDESDAFDSDDE
EVLPSASGTLQSLEGLSNKLDADAANEGEEEVSGEQDDADELDEDDSDEDMDELDDDSDM
DGDTDVSDEDDAEELNDDSENEDSDQEVEDSDEEDKSKGSGSNVQKRKLSDYIGQLDAAD
ASLRALKKLAGAKKAEASTDEAGRIFGDDDFKRIKELKAKKAAKLALVQHGLSKGDTRSV
TFKLPSTDELSLKRVDPSQLAAHVKRKMTKEERLEMVKAGREDRGKYQARAAIKQKKTGG
SSNKQKQHQKRMPLAAKRAKAARSRQEKKTKAKHSGKQFRGRKAWK
NT seq
2481 nt
NT seq
+upstream
nt +downstream
nt
atgcgccagcacgcccccgcctacacgccggaggcggcgtccgcgtcggccacgggcggc
gcgggcgagcggcacagcctcccggcgctgcaggccaagatgaagcgcgacccggagggg
tacgagacggagctccgccagctgcagcgccacttcgagtcctcggtgttcctcttccgg
cagcagtcggcgctgtcctcgtcttcctcgggcggcggcggcggcggggagacggccaag
gagctcggggacctcgcgctcttcctcgcccacgttgcgcccttctaccccaacgacctc
gccgacctgcccgaccagatcgggggcctgctcgacaccaacgcccgcgctctgccgtcg
ggactccgggtgcacctcgtgcaggcgctcatactgctcgtcaatcggaagattgttgat
ctggaagacaccatggagttatttatggagcttcaagtcattggagatcgagcagtaaaa
aagcttgcattttcacatattgtacacagcatcagaaggatgaatcagaagcacaagaat
gaagccaagaatcgtaaactgcaaggcatcctttttaaattagtacagggcgaggaagag
tcgagagcaaagagggcttttactatcctatgcgatcttcaccgtcgaagggtctggttt
gatgaccgcacagcaaatgctatatgcgatgcttgtttccatccttcttcgaggcttatg
acatctgctatttcattgctcattgggtatgaaaatgttgagcaagaggacgatagtgat
gccagcagtgaagatgaagcaattcaaaacccaaatattatacttagtaaagaggatgtt
tacaaggcaaatcacaagggtacctctgctagtaagaaaaagaagaaagctaaattggag
cgtgtagttcgtagtatgaaaaggcaacaacgtaaatccaatgaggagactggctccaat
tactattcgccacttacatatttaaaggatccccagggttttgcagagaaactcttctct
cggctacagaaatgcaatgaacgatttgaggtaaggatgatgatgttgaaggtcatagca
aggactattgggctgcatcacttggttttgttgaacttctatccataccttcaaagatat
gttcaacctcatcaacgagatgtgaccactctacttgctgcagcagtacaggcttgccat
gagatggtgcctcctgatgctgttgaaccgctgttcaagcagatagtaaatcaatttgtg
cacgatcgttcccgtccggaggctattgctgttggcctgaatgttgtgagagagatctgc
atgcgaattccattgatgatgaatgaggatctactccaagaccttgttttatataagaag
tcccacgagaaagctgtttctattgccgctcgctcacttatcacattattcagggagatc
tgtccttcattgttagtcaagaaagatcgtggccgtcctattgatccaactgctcggcca
aaagcatttggagaaaccactatcgctagtgatgtgcctggagctgagttgctagatgaa
gagatgtcattagaagggggttcagatgatgagtctgatgcttttgattccgatgatgag
gaagtgttgccatctgcgagtggtaccctacaaagtttggagggtttatcaaacaagctt
gatgccgatgcagctaatgaaggggaagaggaagtatctggggaacaagatgatgcagac
gaactagacgaggatgatagtgatgaagatatggatgaactagatgacgactctgacatg
gatggtgacactgatgtatctgatgaggatgacgccgaggagctcaatgatgattcagag
aatgaagactcggaccaggaggttgaagacagtgatgaggaggataaatcaaagggcagt
ggttccaatgtccagaagaggaagttgagtgattatattggacaacttgatgcggcagat
gcaagccttcgagctctgaagaagttagcaggagccaagaaggctgaagcttcaacagat
gaagcaggcagaatttttggcgatgatgattttaagcgcataaaagagctcaaggcaaag
aaagcagccaagctggctttggttcaacatggactgagcaagggtgacacaagatcagtg
accttcaaacttccttctactgatgagcttagcttgaagcgggttgatccatcacagctt
gcggctcacgtcaagaggaagatgaccaaggaagagagattagagatggtgaaagctgga
agggaggacagaggaaaataccaagcaagagcagctattaagcagaaaaagacgggtggc
tcgagcaataagcagaaacagcaccagaagaggatgcctctggcggcaaagagagcaaag
gcagcgcgttctcgccaggagaagaagaccaaagcgaagcactcaggaaagcagttcagg
ggacggaaggcctggaagtaa
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