KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123428203
Entry
123428203         CDS       T11213                                 
Name
(RefSeq) DNA-directed RNA polymerases IV and V subunit 2-like
  KO
K16252  DNA-directed RNA polymerase IV and V subunit 2 [EC:2.7.7.6]
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    123428203
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hvg03021]
    123428203
Enzymes [BR:hvg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     123428203
Transcription machinery [BR:hvg03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     123428203
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_7 RNA_pol_Rpb2_4 RNA_pol_Rpb2_3 RNA_pol_Rpb2_2 RNA_pol_Rpb2_5
Other DBs
NCBI-GeneID: 123428203
NCBI-ProteinID: XP_044968321
LinkDB
Position
2H:complement(639249281..639261141)
AA seq 1235 aa
MEDPSSDSGQSTNGAEPELDPMELYDNEESRSHTVDDSNGQSSMDVDRKQLSVDADMNGK
PSLDGDGKGKYSESHAEVPIDMSLGSLERFCKEASRSFFDEVGLISHQINSYNEFVSHGL
QELFDSLGEVTVEPGYDSSKKGTVGGWRRAVIRFGRVKLEKPVFWSGKDDIDEESLKLKP
RHARLQNMTYSSKMEVEVHIQIYSMEKSDKSKTENDVFGHKRVLMDETHLVSIGRLPVMV
NSNLCWLHELKESDCLFDSGGYFLIRGMEKIFIAQEQRCLTRIWVADRPVWTVSYLSEIK
RRRIYVKLIDSTKNDDFSGSKIISISFLYANLPIWLMFFALGIPSDKEAFDMIDMGDCDA
SVINAISATIRESDELCEGFRKSDKARQCVDDLVKSSKFPPGESFDDYVDKYLFPGIKGN
RNKAFFLGYMVKCLLMAFTGKRRCDNKDDFRNKRLELPGQLLGRELRAQLRHAERLMVKA
MQRDMNSDRDLEFPARYLDASIITNGIIRAFATGSWCHPYKRNERCSGIVATLRRTNPLQ
MMSDLRKSRQQVAYAGKAGDARYPNPSYWGKMCFMSTPDGENCGLVKNLAVTAIVSSRVA
QPLIDRFVSCGMNKLDEIPAKEIPKMDKIFLNGDWVGSCADPASFVMRLRCMRRGGLIDP
QVEIKRDKHQSPGEVRVFSDAGRLLRPLLVVENLNKITKRKGCPYSFQALMQQEIIEFIG
VEEEEDIQCAWGIRHLFQSSGEEVSGYTHCELDLSFLLGLSCSLIPFANHNFARRVLYQA
EKHSQQAIGYSTTNPRTRVDTLSHQLFYPQRPLFKTVSADCIGRSDYTFGRKDDFARPEY
FNGQNAIVAVNIHQGFNQEDSLVMNRASLERGMFRTELMRSYKAEVETKGPSKRLKMKEK
VNFGKMESKRGRVDNLDDDGLPYVGSSLQIGDIIIGKVSESGEDHSIKLKHTEKGMVQRV
LLSANDEGKHFAVVSLRQVRSPCVGDKFSSMHGQKGVVGFLESQENFPFTCQGIVPDIVI
NPHAFPTRQTPGQLLEAALGKGIALGGKIRYATPFTTATVEVISEQLHKLGFSRGGVESV
LNGQTGKRMQSLIFAGPNFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGVKFGE
MERDCLLAHGAAANLHERLFTLSDFSEMRICQTCERAANVIMRPVSGGRKIRGPYCGFCR
SSEKIVKIAVPYGAKLLYQELFSMGICLKFQTEVC
NT seq 3708 nt   +upstreamnt  +downstreamnt
atggaagatccatcaagcgatagtgggcaatcaacaaacggcgctgagcctgagctggac
cccatggaattgtatgacaatgaagagagcagatcccatactgtggatgattcaaatgga
cagtcttctatggatgttgacagaaaacagctttctgtggatgctgatatgaatgggaaa
ccatccttggatggtgatggtaagggaaagtactccgagtcacatgcagaagttccaatt
gacatgagcttgggaagcctagagaggttctgcaaggaagcatcaaggtcattttttgat
gaggttggtctgattagccatcagataaattcctacaacgagtttgtctcgcatgggctc
caggagctatttgattcgcttggagaagtgactgtcgagccaggttatgattcctcaaag
aaaggaactgttggtggttggaggcgtgccgtcatcaggtttggcagagtgaaactggaa
aagcctgtattttggtctggcaaagatgatattgatgaggagtcacttaagctgaagcct
agacatgctcgcctccaaaatatgacatattcctccaaaatggaagtagaagtgcatatt
cagatttattctatggagaaaagtgacaagtctaaaacagagaatgatgtttttggtcac
aagagggttcttatggatgaaactcatctggtgtctattggccgccttccagtcatggtt
aattcaaatttatgctggttgcatgaactcaaggaaagtgactgcctttttgattctggt
ggatactttttgatcaggggaatggagaagatattcatcgcccaagagcaaagatgcttg
accaggatttgggttgctgaccggcctgtctggactgtttcttatttgtctgaaatcaaa
cgaagacgcatatatgtgaagctgattgattctacaaagaatgatgatttcagtggcagc
aaaatcatttccatttccttcttgtatgccaatctgccgatttggttaatgttttttgcg
ctaggcataccatctgataaggaagcatttgatatgatagatatgggagactgtgatgct
tctgttatcaacgcgatatctgcaactattagggaatctgatgaactgtgtgaaggcttt
cgtaagtctgataaagcccgccagtgtgttgatgatttggtcaagagttcaaaatttcct
ccaggagagtcgtttgatgattatgtcgataaatatctctttcctggtataaaggggaat
aggaataaagcttttttcttaggttacatggtcaaatgccttctaatggcctttactggg
aagcgcagatgtgataataaggatgatttcaggaacaagaggctggagctacctggtcaa
ctgcttggaagagaacttcgggcgcaacttaggcatgcagagaggctcatggttaaggcc
atgcagagggatatgaacagtgatcgtgatctagaatttccagcgcgctatcttgatgct
tcaattattaccaatggtataattcgtgccttcgctactggttcttggtgccacccctac
aaaagaaacgaaagatgctcaggaattgttgcaacgctcaggagaacaaatcctctccaa
atgatgtcagacttgaggaaaagtcgccagcaggttgcttatgctgggaaagctggtgat
gcaagatatcccaatccatcttactggggaaagatgtgttttatgtccactcctgatggt
gaaaactgtggacttgtgaaaaatttagctgttactgctattgttagctctagagtggca
caaccattgattgacagatttgtttcttgtggaatgaataaactggatgaaattcctgct
aaggagattcccaaaatggacaagatcttcctgaatggtgattgggtaggatcctgtgct
gacccagcttcatttgtcatgcgtttaaggtgcatgagacgtggtggtctgattgatcca
caggttgaaatcaaaagggacaagcatcaatctcctggagaagtacgggtgttttctgat
gcagggcgattactcagacctcttcttgtggttgagaacctaaataaaattacaaaacgg
aagggctgtccatactcttttcaggcactaatgcagcaagaaattattgagttcattggt
gttgaagaggaggaagatatacaatgtgcctggggaatcaggcacctatttcagagcagt
ggagaggaggtttctggttatactcactgtgagctggatctttcttttctgttgggatta
agctgtagtcttatcccttttgcaaatcataattttgcacggagggtgctgtaccaggca
gaaaaacactcacagcaagctattggatactccacaacaaatccacgtaccagagttgat
actctttcccatcagcttttctaccctcagagacccctttttaaaacagtttcagctgat
tgtattggcagatcagattatacttttggaagaaaagacgactttgccaggcctgaatat
ttcaatggacaaaatgcgatagtagcagtcaatattcatcagggatttaaccaagaggac
tccctggttatgaatagagcttctcttgaacgtggtatgtttagaactgagctcatgcgg
agctataaggcagaagtagagaccaaagggcccagcaaacgactgaaaatgaaggagaaa
gtaaacttcggcaaaatggaaagcaagagaggacgagttgacaatcttgatgatgatgga
ttaccttatgtgggttcaagtcttcagattggtgacattataattgggaaagtgtcagaa
tctggtgaagaccatagtattaagctgaagcatacagagaagggaatggtccagagagta
ttgctttcagccaatgatgaggggaagcattttgctgttgtatctttaagacaggttcga
tcaccttgtgttggagataaattttctagcatgcatggacaaaaaggtgttgttggtttt
ctagaatctcaggagaacttcccttttacctgccaaggaatagttccagacatcgtgata
aatccacacgcctttcctacccgtcaaactccaggccagctgcttgaagctgctttgggg
aagggaatcgctcttggtggtaaaatcagatatgcaacaccattcaccacagcaacagtt
gaagtgatctcggaacagttgcacaagcttgggttttcaagagggggagttgaaagtgtt
ctcaatggccaaaccggcaaaaggatgcagtcactgatcttcgcgggccccaacttctac
cagaggctgatccacatggctgaggacaaggtgaagttccggaacacggggccggtgcac
ccgctcacgaggcagccggtcgcggaccgcaagaggttcggcggggtcaagtttggggag
atggagcgcgactgcctgctggcccacggcgcggccgccaacctccacgagcggctcttc
acgctgagcgacttctcggagatgcgcatctgccagacgtgtgagcgtgcggcgaacgtg
atcatgcggcccgtctctggcggtcggaagatccggggcccctactgcgggttctgccgg
tcctcggagaagatcgtcaagatcgccgtcccctacggcgccaagctgctctaccaggag
ctcttcagcatgggcatctgcctcaagttccagacggaggtctgctag

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