KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123428223
Entry
123428223         CDS       T11213                                 
Name
(RefSeq) RNA-binding protein P-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123428223
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hvg03019]
    123428223
   03041 Spliceosome [BR:hvg03041]
    123428223
Messenger RNA biogenesis [BR:hvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     123428223
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123428223
Spliceosome [BR:hvg03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    123428223
SSDB
Motif
Pfam: RRM_1 RRM_7 NMB0537_N SNAPC2
Other DBs
NCBI-GeneID: 123428223
NCBI-ProteinID: XP_044968348
UniProt: A0A8I6WJL9
LinkDB
Position
2H:640666207..640667824
AA seq 507 aa
MAPKKRKADPAAAVADAAAHHEQPEQKPRIGTIYYPITDDPPEPAADAAAAAAAALEDED
LSYDYEEEDVTKLLEPLSREQLVALLRAAAESSPATMAAVRRAAECDPASRKLFVHGLGW
GAGVEDLRSAFSRFGELEDCRVITDKQSGKSKGYGFVLFQSRTSALRALRRPQLSIGGRL
AFCHLAASGPAPPASQSQNPSSNASSGAANNSAPASSSSQADNMQRKIFVGNVHADVDVN
RLYEYFSQFGEIEEGPLGFDKSTGKPKGFALFVYKSVDSARRALEEPMRSFDGKMLNVQK
AIDGRTKGTSGSNSSANNANATAASTQMTVPSIAAINPYDPSAYGAAAVHDMGFAQQAAL
LGMGAQQQAFAQPNTAMLAMMAAAMQNPAMLASLNPAFAAAALGAGGQAGIPGFGAQGFG
TQGFGAAGINFPNASGLQGAAAYQGGPPGFQGSPGFPTSAGFQVGQAASQSGTTAAATGA
AAYQTGAAGQGQVSNSQIGGTGFQGGY
NT seq 1524 nt   +upstreamnt  +downstreamnt
atggcgccgaagaagcggaaggcggatccggcggcggccgtcgccgacgccgccgcccac
cacgagcagccggagcagaagccccgcatcgggaccatctactaccccatcaccgacgac
cccccggagccggccgcggacgccgccgccgccgccgccgccgcgctggaggacgaggac
ctctcctacgactacgaggaggaggacgtcaccaagctgctcgagccgctctcccgggag
cagctcgtggcgcttctccgggcggccgccgagtcgagccccgcgaccatggcggccgtg
cgccgcgcggccgagtgcgaccccgccagcaggaagctcttcgtgcacggcctcggctgg
ggcgccggcgtcgaggacctccgctcggccttctcccgcttcggcgagctcgaggactgc
cgcgtcatcacggacaagcagtcgggcaagtccaagggctacggcttcgtcctcttccag
tcccgcacctcggcgctccgcgccctacgccgcccccagcttagcatcggcggccgtctc
gccttctgccacctcgccgcctcgggccccgcgcccccggcctcccagtcccagaaccct
agctccaacgccagctccggcgccgccaacaacagcgcccccgcttcctcgtcctcgcag
gctgacaacatgcagcgcaagatctttgttggcaacgtgcacgccgatgtcgatgttaat
cgcctctatgagtacttctcgcagtttggtgagattgaggaggggccgctgggctttgac
aagagcactggcaagcccaaggggtttgctctgttcgtttacaagtctgtggacagtgct
cgccgcgccctggaggagcccatgaggagttttgatggcaagatgctcaatgtgcagaag
gccatagatgggaggacaaagggcacatctgggtccaactctagtgctaacaatgccaat
gccaccgccgcttctacacaaatgaccgtgccctctattgccgccattaatccatatgat
ccatcagcatatggtgccgctgctgttcatgacatggggttcgcccagcaagctgccttg
ctggggatgggtgcacagcagcaagcgtttgcgcagcccaatactgcaatgctggcaatg
atggcagctgcgatgcagaacccagccatgcttgcatcgctaaatccagcttttgctgct
gctgcactgggtgccggtgggcaagctggcattcctggttttggagctcagggctttggg
acacaagggtttggggctgctggtatcaattttccaaatgcatcaggtcttcagggagct
gcagcatatcaaggagggcctcctggttttcaggggtcacctggcttcccgacttctgct
gggtttcaggttggccaagcagcttcccaatcgggtactactgctgcggccactggtgct
gctgcttatcagactggggctgctgggcagggccaagtgtccaattcacagattggtggt
actggttttcagggtggctattga

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