Hordeum vulgare subsp. vulgare (domesticated barley): 123428238
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Entry
123428238 CDS
T11213
Name
(RefSeq) double-strand break repair protein MRE11 isoform X1
KO
K10865
double-strand break repair protein MRE11
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03440
Homologous recombination
hvg03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
123428238
03450 Non-homologous end-joining
123428238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hvg03032
]
123428238
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123428238
DNA replication proteins [BR:
hvg03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
123428238
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
123428238
BRCA1-C complex
123428238
NHEJ (non-homologous end-joining)
MRX complex
123428238
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
123428238
NCBI-ProteinID:
XP_044968364
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Position
2H:complement(641456856..641462685)
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AA seq
715 aa
AA seq
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MMMPCPPDLFFLECHCREDDRDTLRVLVATDCHLGYMEKDEIRRFDSFEAFEEICSLAKQ
KEVDFVLLGGDLFHENKPSRSTLVKTIEILRRYCLNDLPVKFQVVSDQTVNFPNRFGHVN
YEDPHFNVGLPVFTIHGNHDDPAGVDNLSAIDILSACNLVNYFGKMDLGGSGVGQIAVHP
VLVKKGTTTVALYGLGNIRDERLNRMFQTPHSVQWMRPESQEGLSVSDWFNILVLHQNRI
KTNPKSAINEHFLPRFLDFVVWGHEHECLIDPQEVPGMGFHITQPGSSVATSLIDGEAKP
KHVLLLEIKGNQYRPTKIPLMTVRPFEYAEVVLKDEADVDPNDQASVLEHLDKIVRNLIE
KSSQPAASRSEAKLPLVRIKVDYSGFSTINPQRFGQKYVGKVANPQDILIFSKAAKKRQT
TTGENIDESEKLRPEELNQQTIEALVGENNLKMEILPVDDLDIALHDFVSKDDKTAFYAC
LQRNLDETRKKLNSEAEKFKIEEEDIIVKVGECMQERVKEISLRSKGDTGLASSTQNLDT
TRGKSVAAESSLNTFSDDEDTRELLLGTRSTRSTAGFTRPSKDATGAAKGGASKRGRGKG
SLKQTTLSFSQSRSSAAIRSEDVDSSSDEDAGDGANEVVENSEPEDSFPQSGRKRPAPRG
RGRARGTTTAKRGRKADTGSMPSMVMSKDDDSDEDDKPKKPPPRATRNYGAVKRR
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgccctgtcctcctgaccttttctttcttgaatgccactgcagggaagacgac
agagacacgctccgggtacttgtggccactgattgccatctgggctacatggagaaggac
gagatacgcaggtttgattcgttcgaggcatttgaggagatatgctcgttagcaaagcag
aaggaggtagactttgtgcttctcggtggtgacctgttccatgagaacaagccttcacgt
tcgaccttggtcaagaccattgagattctacgtcgctactgcctaaatgacctgccagtc
aagttccaggttgtcagtgatcagacagtcaacttcccaaacagattcggccacgtaaac
tatgaagacccacatttcaatgttggcttgcctgtgttcactatccatggaaatcatgat
gaccctgctggggtggataacctctctgctattgatatcctttcggcttgcaatcttgta
aattattttgggaagatggaccttggcggctctggtgttggtcaaatagccgtccatcca
gtacttgttaaaaagggtacaactacagttgcactatatggccttggaaacattagagat
gagcgactgaacagaatgtttcagacaccacattcagtacaatggatgcgacctgaaagt
caagagggtctgtcagtatctgactggttcaatatcctggtacttcatcagaataggata
aagacaaacccgaaaagtgccatcaatgagcatttcttaccacgttttctagatttcgtg
gtatggggccatgagcatgaatgccttattgacccgcaggaggtccctggaatgggtttt
cacatcacacagccaggctcatcagttgcaacctccctgattgatggtgaagcaaaacca
aagcatgttcttttgttagaaatcaagggaaaccagtataggccaaccaaaatacctttg
atgaccgttagaccttttgagtatgctgaggttgtgttgaaagatgaagcagatgtcgac
cctaatgatcaggcctctgttcttgaacatttggataaaattgtaagaaatctgattgaa
aagagtagtcaaccagcagccagtagatctgaagccaaacttccattagttcgaatcaag
gtagattactctgggttttcaacaataaacccacaacgatttggtcagaagtatgtcggc
aaggttgcaaacccccaagatattctcattttctcaaaagcagcaaagaagcgtcagact
actacaggagagaatatcgacgagtccgagaaacttcgtcctgaggaactaaaccaacaa
actattgaagctttggtcggagaaaataacttgaaaatggagattcttccagttgacgac
ttggacattgcattgcatgacttcgtcagcaaggatgacaagaccgcattctatgcctgt
ttgcagcgaaatctggatgaaaccaggaaaaaactgaattctgaagcagagaaatttaaa
atcgaggaagaagatataatagttaaagtcggcgagtgcatgcaggaacgtgtaaaggaa
atatccctccgctccaagggagacacagggctcgcatcaagcactcaaaatttggatact
actagaggtaaatctgtagcagctgaaagtagtctgaacacttttagtgatgacgaggac
acccgggagttgcttcttggtaccagatcaaccaggtcaacagctggttttactagacct
tctaaagatgctactggtgccgctaaaggtggagcttccaaaagaggcagggggaaaggc
tcattgaaacaaaccactcttagtttcagtcaatcaaggtcaagtgctgctattcgcagt
gaggatgtggactcttcctcggatgaggatgcaggggacggagcaaatgaagttgttgaa
aattcagaacctgaggacagtttcccacaaagtggacggaagaggccggctcctagaggt
agaggtcgggccagaggcactaccaccgcaaaaagagggaggaaagccgacaccggttcc
atgccgagcatggtgatgagcaaagatgatgacagcgacgaagatgacaagcctaagaaa
cctccgcctcgggccacgaggaactacggagccgtcaagaggagatga
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