Hordeum vulgare subsp. vulgare (domesticated barley): 123428451
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Entry
123428451 CDS
T11213
Name
(RefSeq) cysteine protease ATG4B-like
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
123428451
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
hvg01002
]
123428451
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123428451
03029 Mitochondrial biogenesis [BR:
hvg03029
]
123428451
Peptidases and inhibitors [BR:
hvg01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
123428451
Membrane trafficking [BR:
hvg04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
123428451
Mitochondrial biogenesis [BR:
hvg03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
123428451
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
123428451
NCBI-ProteinID:
XP_044968598
UniProt:
A0A287JR02
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All DBs
Position
2H:complement(653912193..653917326)
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AA seq
483 aa
AA seq
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MTSLPERGAAPPSDPSSLEGAAAVASSSSSTSSAPDEQRKNGSPKQCKASILSSVLTIFE
PDQDHSSRSGGHASGSYAWSRVLRRFVGGGSMWRFLGCGKALTAGDVWFLGKCYKLSSEE
SSSDSDSEGGHVAFLEDFSSRIWITYRKGFDAISDSKLTSDVNWGCMVRSSQMLVAQALI
FHHLGRSWRKPAQNPSNPEHIRILHLFGDSEVCAFSIHNLLQAGKSYGLAAGSWVGPYAM
CRAWQTLIRTNREQPEVINTNESFPMALYVVSGDEDGERGGAPVVCIDVAAQLCYDFNKG
QSAWSPILLLVPLVLGLDKINPRYIPLLKETFTFPQSLGILGGKPGASTYIAGVQDDRAL
YLDPHDVQLAVNIASDNLEADTSSYHCSTVRDMPLDLIDPSLAIGFYCRDKDDFDNFCCR
ASELAEQANGAPLFTVVQSVQPSKQMYNQDGEPGCSGYGISDNIDVEDLDGSGETGEDEW
QIL
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcttgcctgagaggggtgcagcaccgccatccgacccgtcctcgcttgaggga
gccgccgccgtagcctcttcgtcttcatctacttcctccgccccggacgagcaaaggaag
aacggcagcccgaagcagtgcaaggcctcgatcctctcgagcgttctcaccatcttcgag
ccggaccaggaccactccagcaggtcaggaggccacgcctccgggtcctatgcttggtcg
agggttctgaggcggtttgtgggtggcggctccatgtggcgtttcctgggatgcggcaag
gctctgaccgccggcgacgtctggttccttggaaaatgctacaagctgtcgtccgaggag
tcgtccagcgactcggattctgagggcgggcatgttgcgttcttggaggacttctcatcg
aggatatggatcacctaccggaaaggttttgatgccatatctgattcaaagctcacaagt
gatgtcaactggggctgcatggttagaagcagtcagatgctggttgcacaggcactgatt
tttcaccatcttggaagatcttggagaaagcccgcacagaatccatctaacccagaacat
ataaggatcttacacctgtttggtgattctgaagtctgcgctttctccattcacaattta
cttcaagctggaaagagttatggtctggctgctggatcatgggttggtccatatgctatg
tgtcgggcatggcaaacccttatccgcacaaatagagagcaacctgaagttataaatacg
aatgaaagttttcctatggcgctctatgtggtttcgggtgatgaagatggtgaaagaggt
ggagctccagttgtttgcattgatgttgctgctcagctttgctatgatttcaataaaggt
caatcagcatggtcgcctattcttttgttggttcctctggttcttggtctcgataaaatt
aatccaaggtacattccactactaaaggagacattcacatttcctcaaagcttgggcatt
ttaggtggaaaacctggagcatcgacttacattgctggggtgcaggatgacagggcactc
tacctagaccctcatgatgttcagctggcggttaatatagcatctgataacttggaggcg
gacacttcctcgtaccactgcagcactgtccgagatatgcctctagacctgatagatcca
tccctggctattggtttttactgtcgcgacaaagatgactttgacaatttctgttgtcgg
gcctcggagctggcagagcaggcgaacggagcgcccctcttcaccgtggtgcagtcagtt
caaccgtcgaaacagatgtacaaccaggacggtgaacccggctgttcaggctacggcatc
tctgacaacattgacgtggaagacctcgatggctctggtgaaacaggagaagacgagtgg
caaatcctctag
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