KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123428457
Entry
123428457         CDS       T11213                                 
Name
(RefSeq) SART-1 family protein DOT2
  KO
K11984  U4/U6.U5 tri-snRNP-associated protein 1
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    123428457
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hvg03041]
    123428457
   04121 Ubiquitin system [BR:hvg04121]
    123428457
Spliceosome [BR:hvg03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP specific factors
    123428457
Ubiquitin system [BR:hvg04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    123428457
SSDB
Motif
Pfam: SART-1
Other DBs
NCBI-GeneID: 123428457
NCBI-ProteinID: XP_044968606
UniProt: A0A287JR75
LinkDB
Position
2H:654357181..654362496
AA seq 821 aa
MGEADDARDAVVEEMDIDGGDRHRGKDRRDRHRREDKDHHGSGRRDKDKDKDKDERRRDK
DDTKHRDRDRERERDRDSSKHRDRDSERDRDRGRDRDRGKDRERDTEREREKEKERRDRD
KDRSRNRDKNKEKEDREREKPRGKDRGEDADLSKGDEGDQKKGVDFPGESDQASTNALRD
RIARAKEERLKDQKEGGILDDKDDASEILSWVGKSRKLDEKRQAEKEKALRLARVFEEQD
EMLADDDDDEDDKLEGEHLSGVKVLHGLDKVIEGGAVVMTLKDQSILADGDINEEADMLE
NIEIGEQKQRNEAYKAAQKKGTYDDKFNDDPMSKKPMLSQYDDPMEDEGVTLDEGGRFTG
EAEKKLEELRKRIEGGSVQKKTEDLTSAAKMASDYYTADEMLQFKKPKKKKSHRKKEKLD
LDALEAEAIASGLGAADLGSRNNGKRQSAREVEQKADAEKRSNAYQVAISKAEEASKALR
EEKMPGKPADEEELVFGDDYEDLQKSLEQARKLSLRKQEEAAGSGPLSVAEMAAAHKDQG
DADAAEGDAQQNKVVITEMEEFVWGLQLNEETRKPEAEDVFMDEDDDDMPSGTTAKDDTS
RLGVIKEEAVVEDPKKDIEEQEVAPVEVVHEAAVGKGLGGALKFLKERGTLNEGTNWGGR
TTDKKKSKLVGIEDEAQDGKKEIRIERMDEFGRVMTPKEAFRDLSHKFHGKGPGKMKLEK
RQKKYQDDMKAKQMKSSDTPLMSAEKMRDAQARGQTPYLVLSGNAKSGPTGDASGFASVE
KAHPGSLTPMLGDKKVEHFLGIKRSAQFGGMPPLPPKKPKN
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgggggaggctgacgatgctagggatgcggtggtggaagagatggatattgatggtggc
gacaggcaccggggcaaggacaggagggacaggcacaggagggaggacaaggatcaccat
ggcagtgggaggagggacaaggataaggacaaagataaggatgagaggaggagggacaag
gatgataccaagcatagggaccgggatagggagagggaaagagacagggatagcagcaag
cacagggacagggattcagagcgtgaccgtgaccgtggccgtgaccgtgatcgcgggaag
gaccgggaaagggatacagagagggagcgggaaaaggaaaaggaacggagggatagagac
aaggacaggagccgtaacagagacaagaacaaggagaaggaggatagggaacgggagaag
ccgaggggaaaggaccgtggagaagatgcagatttgtctaagggtgatgagggagaccag
aagaagggagttgacttcccaggagagtctgaccaggcctctacaaatgccctccgggac
cgcattgcgagggccaaggaagaaaggctgaaggatcaaaaggaaggaggaattctggat
gataaagatgatgcttcagagatactatcatgggtaggaaagagtcgtaaacttgatgag
aaaagacaagctgaaaaggagaaggcgttacgtcttgcacgagtatttgaggagcaggat
gagatgttagcagatgatgacgatgatgaggatgataaacttgaaggagagcacttatct
ggagtgaaggttcttcacgggcttgacaaagtcatagaaggtggagcagttgtcatgact
ctcaaagatcagagtattctggctgatggggatatcaatgaagaggctgatatgcttgag
aacatcgagattggtgagcagaagcaaagaaacgaagcttacaaggctgcacagaagaaa
ggaacatatgatgacaagttcaatgatgacccaatgtcaaaaaaacctatgctctcacag
tatgatgacccaatggaagatgagggagtgacacttgatgaaggtgggcgcttcaccggt
gaagcagagaagaagttggaagagctccgcaaaaggattgaaggtggttctgttcagaaa
aagacagaagatcttacttccgcagcaaagatggcatcagattactataccgctgacgaa
atgctgcagtttaagaaaccaaagaaaaagaaatcccataggaagaaagaaaagctagat
ctggatgcacttgaagcagaagcgattgcttctggattgggagcagctgatcttgggtcc
aggaacaatggtaaacgacagtctgctagggaggtagagcaaaaggctgatgctgaaaag
agaagcaatgcgtaccaagtagccatttcaaaggctgaagaggcatcaaaagcattgcgt
gaggagaaaatgcctggtaaaccggctgatgaggaagaacttgtttttggtgacgattat
gaagatctgcaaaaatctctggagcaagcaaggaagctatctctaaggaagcaggaagag
gctgcaggttctggtcctctgtctgtagcagaaatggctgctgcacacaaggaccaagga
gatgcagatgctgcagagggagatgcacaacagaataaagttgttatcactgagatggaa
gagtttgtgtggggtctgcaattgaatgaagaaacgcgcaagccagaagcagaagatgtg
tttatggatgaagacgatgatgatatgccttcaggtactacagcaaaagatgacacaagt
agattgggagtgatcaaggaggaagctgtcgttgaggacccaaaaaaggatatagaggag
caagaagtcgcaccagttgaggttgtgcatgaagctgcagttggcaaggggttgggtgga
gctttgaagtttctaaaggagcgagggaccctcaatgagggcacaaattggggaggcaga
accacggacaagaagaaaagcaagcttgttggtattgaggatgaagctcaggacggaaaa
aaggaaatccgcatagaaagaatggatgaattcggtcgagtgatgacacctaaggaggca
tttagggatctttcacacaaattccatggcaagggaccaggtaaaatgaagctggaaaaa
aggcagaagaagtaccaggatgatatgaaagctaagcaaatgaaatcttctgatacacct
ttgatgtccgcggaaaagatgagagatgctcaagctcgtggccaaacaccataccttgtt
ctaagtggcaatgcaaaatcaggccccacgggtgatgccagtggctttgccagcgtggag
aaggcgcatccgggtagtctgacgcccatgcttggcgacaaaaaggtggagcactttctg
gggatcaaacgaagtgcccagtttggaggcatgccgccgctacctcctaagaagccgaag
aactga

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