Hordeum vulgare subsp. vulgare (domesticated barley): 123428512
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Entry
123428512 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase hel2-like isoform X1
KO
K22381
E3 ubiquitin-protein ligase ZNF598 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123428512
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123428512
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123428512
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAH_ZNF598
zf-C2H2_13
zf-C3HC4_3
RING_ZNF598
Motif
Other DBs
NCBI-GeneID:
123428512
NCBI-ProteinID:
XP_044968672
UniProt:
F2DFJ3
A0A8I7B2U4
LinkDB
All DBs
Position
1H:192256236..192262086
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AA seq
860 aa
AA seq
DB search
MDDSCAVCADALEWVAYGPCGHREVCSTCVVRLRFVLEDSLCCICKTDCPSVFVTKAMGD
YTKVISDFSVLPTEASEGNVGEYWYHEDTKAYFDDADHYKMIRAMCRLSCSVCDKAEDQV
GQAAQAKRRSRFKSIDQLKGHLFHQHRLYMCNLCLEGRKVFICEQKLYTRAQLTQHTKTG
DSEVDGSEVERSGFAGHPVCEYCKYPLYGDNELYTHMSREHYSCHICQRQHPGHYDYFRN
YDDLEMHFRKDHFLCEDDVCLAKKFVVFQSDAEIKRHNAMEHGGRMSRAQRNAALQIPTS
FIYQRNEQDQRRGRGRGRNAHHDRPDRDFPLPVRDGSATADHGLGSQVDSVAGPFQSVSV
SSSSGRTETGRSFGNGRVLEQLSFPPLQDQDIPDARMDAIPYETSFPPVSEQQSRYALAL
NQSSRGSARLGDESLFPPLPGSSNKGSASTQQGLQSLAKNTLASRLQQRSKGTVKVLYSA
RSQTAENPEIVPHVSTSTQTWPKPDQGLHLSGSSQLRIVTQSTRDNGLMPSASSGSAWNS
RASNKMKHSTSTPNFVSGGSSAQASSSTAYGNKSQLPPQSSQPLPVVEDVQQANKSLVER
MRVALGMDEDRFSAFKEIASEYRQGVIDTSEYLSYVEQFGISHLVPEMARLLPDPLKQME
LADAYYTNMRFKSLQENGGCEGITVKENKRKNKGKGKTPDAETVTAKDASESLADSFIDT
VRKLQSNNKTQGEAAVLSKDGYRSSKEKIPLSAGGSCSGTNLGLDGDPVAISKASGTSRY
VGKGGGSSSSSSSDKQSKKTSKFLRARLGDNSLATLDFSHPDVSPERPEKETQVLQTGLP
VRSVWKNGAAQKLFSSNEKK
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atggatgacagctgcgcggtatgcgcggacgcgctcgaatgggtggcctacgggccatgc
gggcaccgcgaggtgtgttcaacctgcgtcgtccgccttcgcttcgtactcgaggactct
ctatgctgcatctgtaagacggattgcccctccgtattcgtcacaaaggccatgggagat
tacacaaaagtgatctccgatttctctgttttgcccactgaggcaagtgagggaaatgtg
ggggagtactggtaccatgaggatacaaaggcatactttgatgatgccgatcattataag
atgataagggcgatgtgccgactttcttgtagtgtatgtgacaaagctgaggatcaggtt
ggtcaggcagcacaagcaaagcgccgaagcaggttcaagagcattgatcagctaaaggga
catttgttccatcagcataggttatacatgtgtaatctttgcttggaggggagaaaggta
tttatttgtgaacagaagctttatacaagggcacagttaactcagcatacaaaaacaggt
gactctgaggtggatggctctgaggttgaacgcagtggttttgctggacacccagtgtgt
gaatattgtaaatatccattatatggagataatgagctttacacacatatgtccagagaa
cactattcgtgccacatatgtcaaaggcagcatcctgggcactatgattatttccggaac
tatgatgatttagagatgcattttcgtaaagatcatttcctctgcgaagatgatgtatgt
ttggccaagaagtttgttgtctttcaaagtgacgcagagatcaagagacataatgctatg
gagcatggtgggcggatgtcccgtgcccagaggaatgccgcacttcagatacctaccagt
tttatataccaaaggaatgagcaagatcaaaggcgtggcagaggtaggggtcgtaatgct
caccatgatagacctgacagggatttcccattacctgtgcgggatggcagtgcaactgca
gaccatggccttggaagtcaagttgatagtgttgcagggcctttccagtcagtaagtgtc
agttctagttctggtcgaacagaaactggtcgaagcttcgggaatggtcgcgtgcttgag
caattgtcttttcctccacttcaagaccaggatattcctgatgctaggatggatgccatt
ccctatgaaacctcgtttcctcccgtctcagagcagcaatcaaggtatgcgctggctctt
aatcagagctcaaggggttctgcaaggcttggtgatgaatcattattccctccattgcct
gggtcaagtaacaagggttctgcttcaacacaacaggggctgcaaagtcttgctaagaac
acacttgcatcaaggcttcaacaacgtagtaagggcaccgtgaaggtactatattctgct
cggtctcaaacagctgaaaatcctgagatagtacctcatgtttccacttccacccagaca
tggcctaaacctgaccaggggctacatctttctggttcttctcaacttcggattgtaact
caatcaacaagagataatgggctcatgccatctgcctccagcggttcagcatggaattcc
agagcttcaaacaagatgaagcactctacatcgacccctaattttgtttctggtggatcc
tctgcccaggcatcatcaagtacagcttatggcaataaaagccaactgccaccacaaagc
agccaacctttgcctgttgtcgaggatgttcagcaagcaaacaaatcgcttgtggaaaga
atgcgtgttgcattaggaatggatgaggataggttctctgcgttcaaagaaattgctagt
gaataccgtcaaggtgtcattgatacttcagagtatctctcgtatgtcgagcagtttggt
atatcacatcttgttcctgaaatggctaggttgttgcctgatcctctgaagcagatggaa
cttgctgatgcctattacaccaacatgcgctttaaaagtctccaagaaaatggtggttgt
gaaggcattaccgtgaaagagaacaagcgtaaaaataaggggaagggaaaaactcctgat
gcagaaacagttactgctaaggatgcaagtgaatcgctagctgatagctttattgacact
gtaaggaagcttcagtcaaacaataagactcaaggagaggctgcggtgctctcaaaggat
gggtatcgatcttccaaggagaagatcccactatcagctggagggtcatgctctggtaca
aatttgggtctagacggtgatccagttgccatctcaaaggcgtctggcaccagtaggtat
gtgggcaagggtggaggaagcagcagcagcagcagcagcgacaaacaatcaaagaagacg
tcgaagtttctcagagctcggttgggtgacaactcattggctacacttgattttagtcat
cctgatgtgagccctgaacgacctgaaaaggagacacaagtcctacaaactgggttgcct
gtgcgaagtgtttggaagaacggtgcggcgcagaagctcttttccagcaatgaaaagaaa
tag
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