Hordeum vulgare subsp. vulgare (domesticated barley): 123428647
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Entry
123428647 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123428647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123428647
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123428647
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123428647
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
Motif
Other DBs
NCBI-GeneID:
123428647
NCBI-ProteinID:
XP_044968784
UniProt:
F2DJJ6
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Position
1H:complement(195770552..195804655)
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AA seq
403 aa
AA seq
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MRAVPLPRRPVPNQTNPDYPKATNPPRRPGASVLNSQRNQEKHGDGRRGTRAGEATMDMD
SVECLSLPDASMDVDDVNSHQQYHHHNSIPIHPVHLAASGGVGGRAFAKMNAGAAAAAGG
VGATAGAAGGPPATSVHELLECPVCINSMFPPIHQCQNGHTLCSTCKARVHNRCPTCRQE
LGDIRCLALEKVAESLELPCKYCSLGCPEIFPYYSKIKHEGQCSFRPYNCPYAGSECAVA
GDIPFLVAHLRDDHKVDMHSGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAF
QLGMAPVYMAFLRFMGDENEARNYTYSLEVGGNGRKMVWEGTPRSIRDSHRKVRDSHDGL
IIQRNMALFFSGGDRKELKLRVTGRIWKEQPNPDETCIPNLCS
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgagagcagtgccgttgccccgtcgtcccgtgcccaaccaaaccaatcccgattaccca
aaggcaacgaacccaccgcggcggccaggcgcctccgtcctcaattcccagcgcaaccaa
gagaaacacggagacggacgccggggcacgcgcgccggggaggccaccatggacatggac
agcgtggagtgcctctccctccccgacgcctccatggacgtggacgacgtcaacagccac
cagcagtaccaccaccacaacagtatcccgatccatcccgtgcacctcgccgctagcggg
ggcgtcgggggacgcgcgttcgcgaagatgaatgccggggccgcggccgctgccggggga
gtgggtgctacagcgggcgccgccggtgggccaccggcgaccagcgtacacgaattgctc
gaatgtcctgtctgcatcaactccatgttcccgcccatccaccagtgccaaaatggacat
actttatgttcgacatgcaaggctagggtgcacaaccgttgccctacatgcagacaagaa
cttggtgatatcaggtgcttggcattggagaaagtagcagaatcgctagagcttccgtgt
aagtactgctctttaggttgtccggagatcttcccatactacagcaagataaaacatgaa
gggcagtgcagcttcaggccatataactgcccctatgctggttctgaatgtgctgtggct
ggtgatatcccttttcttgttgcacatttgagggatgaccacaaagtcgatatgcacagc
ggttgcacgttcaaccatagatatgtcaagtctaatccacgagaggttgaaaatgccacc
tggatgctaacagtgttccattgttttggacagtacttctgcctgcactttgaagccttc
cagcttggcatggcaccagtatacatggctttccttcgtttcatgggggatgagaatgaa
gcaaggaactacacctacagcctcgaggtcggcggtaacggtaggaagatggtatgggag
ggcacccctagaagcattcgtgacagtcaccggaaggtccgggacagtcatgatggcctc
atcatccagaggaacatggcgctgttcttctccggtggtgacaggaaggagttgaagttg
agggtgactggacggatttggaaagagcagcccaatccggatgaaacctgtatacccaac
ctttgtagctga
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