Hordeum vulgare subsp. vulgare (domesticated barley): 123428830
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Entry
123428830 CDS
T11213
Name
(RefSeq) adoMet-dependent rRNA methyltransferase spb1-like
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123428830
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
123428830
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
DUF3381
Motif
Other DBs
NCBI-GeneID:
123428830
NCBI-ProteinID:
XP_044968895
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All DBs
Position
2H:complement(627266569..627277119)
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AA seq
509 aa
AA seq
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MASAMPMDAGIGKQRRHDKFDLLAKEQGYRSRAAFKLLQLDTLFRFLPTARAVLDLCAAP
GGWVQVAVSRAAPGAFVVGVDLAPIRPISGALSLKEDITASARCGAAVRRLMDSRGVASF
EVVLHDGAGRKKKCGGTGASAAQEATTTQSALVMDAVRLATMFLAPNGTFITKFFRCQDY
NAIMFCLKQLFERVHLSRPVASRCTPAEIYVICLRYKAPANIQPELLDLKHLHLMSVDAE
KSKRQESTEFWKTGLASDFIWSEAQTPLDFLGSFLTISFDDPASLPMKNHELTTDEIKDL
CEYLFVLRENGYNHLLKWRMRIRKALLSCSQVTLKADGTVTDSKGSDDDQLLHEVEDLKN
IVDTKRMKVKHQSRPHAKGKAHKTSGMQIGATEDGYGDPDLFPICAIEGEKELHAAESPL
LDLEEDIRNSENEETQALEDSGEEMDYDQEQQRYGAQVKGILDEAQVPFGTEKCGEVKRP
SKHAKRTNPYGNTEVISSLVYMIISPKKD
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagccatgcccatggatgcggggatcgggaaacagcggcggcacgacaagttc
gacctccttgcgaaggagcaagggtaccgaagtcgcgcggccttcaagctgctccagctc
gacacgctcttccgttttctcccgacggctcgcgcggtgcttgatctctgcgccgcgcct
ggggggtgggtccaggtggccgtcagccgcgccgcccccggcgccttcgtcgtcggtgtc
gacctcgctcccatccgccccatcagcggcgctctctctctcaaggaagacataactgcc
agtgccaggtgcggcgccgccgtgcggcggctcatggattcaaggggcgtcgcatcattt
gaagtcgtcctccacgacggtgctggacgaaagaaaaagtgcggtggcaccggtgcatcg
gctgcgcaggaggccaccaccacgcagtcagcgcttgtcatggacgccgtgcgcctagct
accatgttcctcgcccccaatggcaccttcatcactaagttcttcaggtgtcaagattac
aacgctataatgttctgcctgaaacagctatttgagcgtgtccatctgagtagacctgta
gcaagtcggtgcacgcctgctgaaatttatgttatctgtctgagatataaagcccccgca
aacattcaaccagaacttcttgatttgaagcacttgcacttgatgagtgtggatgcagag
aagagcaagcggcaggaaagcacagaattctggaaaactggtctagcatcagattttata
tggtctgaggcccagacaccactggactttcttggttcttttttgacaatttcatttgac
gatccagcatctctgcctatgaagaatcatgagcttactacagatgagataaaagacctt
tgtgaatatttgtttgtgctgcgtgaaaatggctacaatcatctcttgaaatggcgcatg
cgcataaggaaagcactgttgtcatgttcacaagtgacactaaaggctgatgggactgtg
acggacagcaagggcagtgatgatgaccaacttttacacgaagtggaagatttgaagaat
attgttgatacaaagagaatgaaagtgaagcatcaatcaaggcctcatgcaaagggtaaa
gcacacaagacatcaggaatgcaaattggtgccacagaagatggttatggtgatcctgac
ttgtttcctatttgtgctattgagggcgaaaaagaacttcatgctgctgagtcaccactg
cttgatttggaagaagacattagaaacagtgagaacgaagaaactcaggctcttgaggac
tctggtgaggaaatggattatgatcaagaacaacagaggtatggcgctcaggtcaagggg
attcttgatgaagctcaggtgccctttgggactgaaaagtgtggagaagtcaaacgtccg
agcaaacatgcaaagcgtaccaatccctatggcaatacagaggtaatatcgagcctagtt
tacatgatcattagtccgaagaaggattga
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