Hordeum vulgare subsp. vulgare (domesticated barley): 123428879
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Entry
123428879 CDS
T11213
Name
(RefSeq) probable E3 ubiquitin-protein ligase RNF144A-A
KO
K11975
E3 ubiquitin-protein ligase RNF144 [EC:
2.3.2.31
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123428879
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
123428879
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
123428879
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
IBR
IBR_1
Rcat_RNF216
IBR_2
zf-C3HC4
zf-C3HC4_2
zf-RING_2
zf-RING_UBOX
zf-RING_5
Motif
Other DBs
NCBI-GeneID:
123428879
NCBI-ProteinID:
XP_044968925
UniProt:
A0A8I6WUF8
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Position
2H:complement(640942992..640944053)
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AA seq
323 aa
AA seq
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MADSDLTGLVDDFYFSALTHAQNDADAGEDDQLFPISDEKYAAELQLQEVIMSSAIAATA
TSSRSSFPARRSTTATSSSAVVIYGECSSAVASSSSCSGRPGSSASASATATATLVFCKI
CMDAVPESDAHRASRGCVHAFCTSCLAGYIGAKIQDRIADVKCPEEQCAGVLDPALCQGM
LPREVFERWGAALCESMMLGAKRTYCPYKDCSAMMVADDDSAGDITQSECQVCRRLFCAR
CGVPWHAGADCAAYRKLGRGDRGKEDLLLLETAKLKKWKRCPKCEFFVEKTDGCLHITCR
CSFQFCYGCGGQWGVTHASCSTG
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggcggactcggacctcaccggcctcgtcgacgacttctacttctctgccctcacccac
gcccagaacgacgccgacgccggcgaggacgatcagctgttcccgatatccgacgagaag
tacgccgccgagctccagctccaggaggtgatcatgtcgtccgccatcgcggctaccgcc
acgtcgtcgcggtcgtcgttcccggcgcgtcgcagcaccaccgccaccagcagcagcgca
gttgtcatatacggtgagtgctcctctgccgtcgcctcttcatcttcgtgttccgggcgg
cccggctcctctgcatctgcctccgcgacggcgacggcgacgctcgtgttctgcaagatc
tgcatggacgccgtgccggagtcggacgcgcaccgcgcgagccgcggctgcgtgcacgcc
ttctgcacgtcctgcctcgcgggctacatcggggccaagatccaggaccggatcgccgac
gtaaagtgcccggaggagcagtgcgccggagtgctcgacccggcgctctgccagggcatg
ctcccgcgggaggtgttcgagcgctggggcgcagcgctgtgcgagtccatgatgctcggt
gccaagaggacctactgcccctacaaggactgctcggcgatgatggttgcggacgacgac
agcgccggcgacataacgcagtccgagtgccaggtgtgcaggcggctgttctgcgcccgg
tgcggcgtgccgtggcacgccggcgccgactgcgccgcctacaggaagctcggcaggggc
gacaggggcaaggaggacctgctgctgctggagacggccaagctgaagaagtggaagcgg
tgccccaagtgcgagttcttcgtggagaaaaccgacggctgcctgcacatcacctgcagg
tgcagcttccagttctgctatggatgtggggggcagtggggcgtgacgcatgctagctgc
agcacagggtga
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