Hordeum vulgare subsp. vulgare (domesticated barley): 123428892
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Entry
123428892 CDS
T11213
Name
(RefSeq) ribosomal RNA small subunit methyltransferase I isoform X1
KO
K07056
16S rRNA (cytidine1402-2'-O)-methyltransferase [EC:
2.1.1.198
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123428892
Enzymes [BR:
hvg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.198 16S rRNA (cytidine1402-2'-O)-methyltransferase
123428892
Ribosome biogenesis [BR:
hvg03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
123428892
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Gene cluster
GFIT
Motif
Pfam:
TP_methylase
RsmI_C
DUF3253
Motif
Other DBs
NCBI-GeneID:
123428892
NCBI-ProteinID:
XP_044968936
UniProt:
A0A8I7B2V0
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Position
1H:213119801..213158806
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AA seq
335 aa
AA seq
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MASLLRLQALFSLTLATPRCLPSHLRCVAAVASPVPSRLPAAASNGSPEQRASETTLESG
LYLVATPIGNLEDITLRALRVLKCACVILSEDTRHSGKLLQHYNIKTPLLSFHKFNERER
EPIILKRLHEGEAIAVISDAGTPGISDPGMELARLCMTEKIPVIPIPGPSAAIAALSASG
LPTEEFTFVGFLPKHGRSRKARLEVSAREAVTQIFYVPPHGIQQFLVDAASSFGDSRSCV
IAREITKLHEEFWRGTLGEANEAFATRQPKGEITILIDGNSISIVEKPSDDFLEHELREL
MAKGHALSTAVKLVAEATSAKKKDVYALALRVFGK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctctgctccgcctccaggccctcttctcccttacgctggccactccccgctgt
ctcccatcccatctccgctgtgtcgcagcagttgcgtctccggtccctagccgccttccc
gctgccgcctcgaacggctcgccggagcagcgggcctcggaaacgactttggaatcaggg
ttgtatctagtggcgacacccattgggaacctcgaggatatcaccttgagggcattgcgt
gttctgaaatgtgcttgtgtgatactctctgaagacacaaggcattctggaaagttactt
cagcattacaacatcaagacacctcttctcagcttccataagttcaatgagcgcgagaga
gagcccattatcttaaagaggctccatgaaggggaagcaattgcagtgattagtgatgct
ggcactccaggcatcagtgaccctggcatggagctggctagactatgcatgactgaaaaa
attcctgttattcccattcctgggccttctgccgcaattgccgctctttctgcatcgggt
ttgccaaccgaggaattcacatttgtgggttttttaccaaagcatggtcgatcaagaaaa
gctaggcttgaggtatctgctcgtgaggctgtgacacaaatattctatgttcctcctcat
ggaattcaacagtttcttgttgatgctgcttcgtcttttggtgattcaaggtcatgtgtt
attgcaagggagataaccaaattgcatgaagagttttggcgaggaactctaggagaagca
aatgaagcctttgcaactcgacagccaaagggagaaatcaccatcctcatagatgggaac
tcaatttcaattgttgaaaaaccatctgatgattttcttgagcatgaactcagagaattg
atggcaaaagggcatgctctttcaacggcggtgaaattggtagccgaagctacatcagca
aagaagaaagatgtttatgcactagcactgagggtgtttggaaaatga
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