KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123429570
Entry
123429570         CDS       T11213                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03030  DNA replication
hvg03410  Base excision repair
hvg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    123429570
   03410 Base excision repair
    123429570
   03420 Nucleotide excision repair
    123429570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hvg03032]
    123429570
   03400 DNA repair and recombination proteins [BR:hvg03400]
    123429570
Enzymes [BR:hvg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     123429570
DNA replication proteins [BR:hvg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    123429570
DNA repair and recombination proteins [BR:hvg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      123429570
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 DNA_pol_B zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 123429570
NCBI-ProteinID: XP_044969537
UniProt: A0A8I6WFC8
LinkDB
Position
1H:complement(234650790..234681911)
AA seq 2220 aa
MSGGDGRRRRPSAGGGGGGGGGGGGGGGSWGGRRSGSSAAKEQRLRLGAEELLEGRLGFA
PYTQGDRRLGWLLTFSPSSWEDEDTGKIYSCVDLYFVSQDGSTFKVKYKFPPYFYAATKE
KTELEVEAYLRRRYEGEIADIEIIEKEDLDLKNHLSGLKRKYLKIQFDTVQQLMRVRSDL
MHVVEKNEEERDAVDAFESIYGVKRVERPQDYINCIIDLREYDVPYHVRFAIDNDVRSGQ
WYNVGVSGSDVLLQRREDLLQRAEVHVCAFDIETTKLPLKFPDAEYDSVMMISYMIDGQG
YLIINRECVGEDIEDLEYTPKPEFEGHFRVKNVADEVGLLKAWFSHMQEVKPGIYVTYNG
DFFDWPFLEKRAAHHGIKMNEEIGFQCDSNQGECRAKFSCHLDCFAWVKRDSYLPQGSQG
LKAVTKAKLGYDPLEVNPEDMVRFAMEQPQTMASYSVSDAVATYYLYMTYVHPFIFSLAT
IIPMSPDEVLRKGSGTLCEMLLMVQAFKASIICPNKHQSDLEKFYNNRLVESETYIGGHV
ECLETGVFRSDLPTKFQLEPSAFEQLIENLDRDLQYAIAVEGKLDIDSVTNYDEVKDAIK
QKLVSLRDHPTREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDVDCTACDFNRPGKNCL
RTLEWVWRGETYTAKKSDYHHIKRQIESEMIQAGGVTSSKPFLDLSKPEHLLKLKDRLKK
YCQKAYKRVVDKPITEVREAGICMRENSFYVDTVRSFRDRRYEYKGLNKTWKGKLSEAKA
SGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQ
NARLLVDKIGRPLELDTDGIWCVLPGSFPENFTFKTKAEKKLTISYPCVMLNVDVARTNT
NDQYQTLKDPVNKLYTTNSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNEDGTLA
ELKGFEIKRRGELKLIKVFQAEVFDKFLHGSTLEECYAAVASVANRWLDLLDNQGIDISD
SELLGFISESSTMSKSLVDYGEQKSCAVTTAKRLAEFLGDSMVKDKGLHCQYIVAREPQG
TPVSERAVPVAIFETDAEVAKFYLRKWCKVSTEANIRFILDWSYYKQRLSSAIQKIITIP
AAMQKISNPVPRVLHPDWLHKKVREKDDRFRQRKLRDMFSPLNKDMGMHNLNGTGDIEDL
LTSDKGLRKVTASHGFNMGKENHPNGLPSAEASLGHCKNQQKSVIRSNEPLRDDSADERV
DRSTDYQGWLEARKRKWKYVREQKKRRRLGAAASSEGPSNNLFSARNGSQLHGNGRNRST
FFQKQELSLFRSHWQIIQLAPSTMPGRFFAWVVADGIMFKIPINVPRVFYLNTKAPITDE
FPGRRVKKILPHGKPSFNLIEVVTSEEQFRTEGRKLAAHLAEPDVEGIYETKIPLELNAI
LQIGCVCKVDKSAKKRNIQDGWDLAELQMKTTAEFSYLEQTVSFFYLYHSLSEGRAVYVM
YFPTSLRVHAVVVNPFRNKELSPAFLEKQFRDACQTADPLHENLTFHVDYHTSMDAGSKY
VQRMLLEYRQQHPGPVIGIIECPKLQAIRESVRALDDFPCVTIPCNARDNNYQALGWQAT
AGRTSMQRCAASTQWFNERISLARYAHVPLGNFELDWLLFTADVFFSRALHDQQQVLWIS
DDGIPDLGGTYEGDTCFADEVIQPALTYPGAYRRVSVELKIHHLAVNSLLKSSQVDEMEG
GSIGNFENDIPPGPNATETDYNDASLCLPAFQVLKQLIQRCISDAVSSGNVFADAILQHL
YRWLCSPRSRLHDPALHRLLHNVMKKVFALLLAEFRKLGANVIFANFSKIIIDTGKVDLP
SARAYCDSLLKTLQTRDLFEWIELEPLHYWHSLLFMDQYNYGGIQAKTQNVTSVDSSDGE
DDIDIVSSWNIAEYLPKATQDHFVLIVSEFLYVPWKYMKEQVACRAAVRDDTSCTPSITI
MAAENLEGQVVDYLRGQIGTYFAEKLLTIVSDILLHFKGKGKSESVGPSNRELDPHLHKG
DAALEFIKHICAVLALDQNVQHDILRMRKNLLKLVRVKEFAPEAQFQDPCAAFILPNVIC
SYCNDCRDLDLCRDSTLQGHEWRCAVPQCGQPYHREEMENALLQIVRQRERLYHLQDLVC
VRCRQVKAAHVSEQCNCGGSFRCKEEAPQFLGKMRVFLNVAVSQKFELLQDCVRWILEVR
NT seq 6663 nt   +upstreamnt  +downstreamnt
atgagcggcggtgatggccggcgacggagaccgtcggccggaggaggtggaggcggcggt
ggcggtggcggcggcggcggcggcagctggggcggtcggaggtctggatcttcggcggca
aaggagcagcggctacggctgggcgcggaggaactcctcgagggccggcttggcttcgcg
ccctacacccaaggcgaccgccggcttggctggctcctcaccttctccccctcatcatgg
gaggacgaggatacagggaaaatctacagctgtgttgacctgtactttgtgtcccaggat
ggttctacatttaaagtgaagtacaagttcccaccttatttttatgctgcaactaaggag
aagacggagttggaagttgaggcatatctcaggcgacgttatgaaggggaaatcgctgat
atagaaataattgaaaaagaggatctggatcttaaaaaccacctttcgggtttgaagaga
aaatatttgaagattcagttcgataccgtgcagcaattaatgcgtgtgaggagtgatcta
atgcatgttgttgaaaagaacgaagaagaaagagatgctgtggatgcatttgaatcaatt
tatggtgtaaaaagggtagaaaggccacaagattacataaactgtatcatcgatttgcgt
gaatatgatgttccctatcatgttcgtttcgctatagataatgatgtgagatctggacag
tggtataatgttggtgtatctggttctgatgttttgcttcagagaagggaagatctgctt
cagcgtgcagaagttcatgtatgtgcatttgatattgagaccacaaagctgcccttgaag
tttccagatgctgaatatgacagtgtaatgatgatctcctacatgattgatgggcaaggg
tacttgataatcaaccgagagtgtgtaggggaagatattgaagatttggaatacacacct
aaaccagaattcgagggacattttagagttaagaatgtcgcagacgaggtgggtctacta
aaagcttggttttctcacatgcaagaggttaaacctggtatttatgttacatacaatggt
gacttttttgactggccgtttttggagaagagagctgcccaccatgggataaaaatgaat
gaggagattggttttcaatgtgacagtaatcaaggcgaatgccgagctaaattttcctgt
catcttgactgttttgcctgggtgaagcgagacagttaccttccacagggaagccaaggt
ctaaaggctgttacaaaagccaagcttggttatgatcctctggaggtcaatccagaagat
atggttcgctttgcaatggagcagccacagacaatggcttcttattctgtatcagatgct
gttgcgacatactacttatacatgacttacgtccatccttttatcttctcccttgcgacc
ataatacctatgtcacctgatgaggtgttgcggaaaggaagtgggacactatgtgaaatg
ctactaatggtccaggcattcaaggctagtatcatttgtcctaacaagcaccaatctgat
ctggagaagttttacaataaccgtctagttgaaagcgaaacatacattggtggtcatgtt
gagtgtcttgaaactggtgtatttagatctgatcttcctacaaaatttcagctggaaccc
tcagcatttgagcaactaattgaaaaccttgaccgtgatctgcaatatgccattgctgta
gaaggaaaattggatattgattctgtaacaaattatgatgaagtcaaggatgccataaag
caaaagcttgtttctttgcgagaccacccaactcgtgaagaatgccctcttatatatcat
ctggatgttgctgcaatgtatccaaatatcattttgacaaacaggctccagccaccatcc
atagttacagacgtggactgcacagcatgtgatttcaatcgccctggaaagaattgcctt
agaacgctcgaatgggtctggcgaggagaaacctacacggcaaaaaagagtgactatcat
catataaagaggcaaattgagtcagagatgattcaagctggtggggttacatcttcaaag
cctttccttgacctctcaaaaccagagcatttactaaagctgaaggatcgtttgaagaag
tactgccagaaggcgtacaaaagagtagttgacaaaccaattacagaagttagagaagct
ggaatatgcatgcgtgaaaattctttctacgtagatacagtgcgaagctttcgtgataga
aggtatgaatacaaaggcctgaataaaacatggaaaggaaaactgtcagaagcaaaagcc
agtggaaattctatcaaaattcaggaagcacaggacatggttgtgctatatgattctttg
caacttgctcacaagtgcatattaaattctttttatggatatgttatgcgcaagggtgca
agatggtactctatggaaatggctggcgttgtaacatatactggtgcaaagatcatccaa
aatgctcgattacttgtagacaaaattggaagaccactggaacttgacacagatggcatt
tggtgtgttttgcctggttctttcccagagaattttactttcaagacaaaagctgagaag
aagctcacaatatcttatccatgtgtgatgcttaatgttgatgttgcaagaaccaacacc
aatgatcaatatcaaacactgaaagatcctgtaaacaagctatatacaacaaatagtgaa
tgctccatcgaatttgaggttgatggaccatacaaggccatgattctacctgcctctaaa
gaggaagggattctgataaagaagaggtatgctgtcttcaacgaagatggcaccctggca
gaacttaaaggttttgagattaagcgtcgaggtgagctgaagctcatcaaagtttttcag
gcagaggtatttgataaatttctccatggctctactttagaggagtgctatgcagctgtt
gcctctgttgctaaccgctggttagatctactggacaatcaaggaattgatatttctgac
agtgagttgcttgggttcatatcggagtcaagcacaatgagtaagtcccttgttgactat
ggagaacagaagtcatgtgctgtaactacagcaaaaagacttgcggaattccttggagat
tcaatggttaaagacaaaggactgcattgccaatatatagttgcccgagagccacaaggc
accccagtgagcgaacgtgctgttccggtggctatttttgagacagatgctgaggttgca
aagttctatttaagaaaatggtgcaaagtctctacggaagcaaacatccgatttattctt
gattggtcttactacaaacagcgcctaagctcggctattcagaagatcataactattcct
gcagcgatgcaaaagatttcaaatcctgttccccgagttcttcatcctgattggttgcat
aaaaaggtcagagagaaggatgatcgatttcgccagcgcaaactacgtgatatgttcagt
cccttgaataaagacatggggatgcataacttgaatggaactggggacatagaggattta
ttgacatcagacaaaggtttgagaaaagtgactgcatcccatggttttaacatgggcaaa
gaaaatcatccaaatgggttaccatcagcagaagctagtttgggtcattgcaaaaaccag
caaaaatctgtaatcaggtcaaatgaaccactccgagatgactctgctgatgaaagggtt
gatagaagtactgattatcaaggatggcttgaggccaggaagagaaaatggaaatatgtc
cgcgaacaaaagaaacgtcggaggttgggtgctgcagcctcttctgagggtcctagtaat
aatttgttttctgcaagaaacggcagtcagttacatggcaatggtaggaatcggtctaca
tttttccagaaacaagagttgtccctctttagatcacattggcagataatccagcttgct
ccaagtacaatgcctggccgtttttttgcatgggttgttgctgatgggatcatgttcaag
attcccatcaacgtgcctagagttttctacctaaacacgaaagctcctatcacagatgag
tttccaggaaggcgtgtaaagaagattcttcctcatggaaaaccatctttcaatctcatt
gaggttgtaactagtgaagaacagttcaggactgaaggaagaaaacttgctgctcatctt
gcagagccagatgttgaaggcatatatgagacgaaaattccactggagctaaatgctatt
ctccaaattggttgtgtctgtaaagtggacaaatctgcaaagaaacgaaatatccaagat
ggatgggatcttgctgagttgcaaatgaaaacaactgcagagttctcatacctggaacaa
acagtttcatttttctatctataccacagtttgtctgaaggaagggctgtatatgtcatg
tacttccctacatctctcagagtacatgcagtggttgtcaatcctttccgtaataaagag
ctgtcacctgcatttcttgaaaagcaatttcgggatgcttgccaaactgctgaccctttg
catgaaaatcttactttccatgtggactaccacacatcaatggatgcaggtagcaaatat
gtgcaacgaatgttacttgagtacagacaacaacatcctggacctgtcataggcatcatt
gaatgtcctaaactccaagctataagggaatctgtacgtgcacttgatgatttcccgtgt
gtaaccattccttgcaatgcacgggacaacaactatcaggctcttggctggcaagcgaca
gctggtagaacaagcatgcagcgttgtgctgcatcaactcaatggttcaatgaaagaatt
tcacttgctagatatgcacatgtgccgttgggaaactttgaacttgattggcttcttttt
actgctgatgtgttcttctcaagggcgttgcatgatcaacaacaggtactatggatatct
gatgatggtattcctgatttaggcggcacatatgaaggagatacatgctttgctgatgaa
gtcattcaacctgcactaacatatcctggcgcttataggagggtttctgttgagcttaag
attcatcatttggcggttaattctctccttaagagcagtcaagtggatgaaatggaagga
ggatccatcggcaactttgaaaatgacattccacctggcccaaatgccaccgaaactgac
tataatgacgccagcttgtgtctacctgctttccaagtgctgaaacaactcattcaaaga
tgcatctcagatgcagtgtcttctggaaatgtatttgctgatgcgatattgcaacatctt
taccgttggctttgcagcccacgatcaagacttcatgacccagctctccatcgtctcctt
cataatgtcatgaagaaggtctttgctctattgttagctgagttccgaaagcttggagct
aatgttatctttgcaaacttttctaagataatcatagatactggaaaagtggacttgccg
tcagcacgtgcatactgtgatagcttgctgaaaaccttacagacaagggatctttttgag
tggatagagctggaacctttgcattattggcactccttactgttcatggatcagtacaac
tacggtgggattcaagctaaaacacaaaatgtaacatctgtagacagttcagatggtgag
gatgatattgacatcgtgtcaagctggaatatagcagaatacttgcccaaagctacacag
gatcactttgtcttgatcgtatcggagttcctttatgttccatggaaatacatgaaagaa
caagtagcatgtcgagcagctgtaagggatgacacctcatgcactccatctataacaatc
atggctgctgagaatcttgagggacaggtcgttgattacctccgtgggcagatcggcact
tattttgcagaaaagcttctcacaattgtgagtgatatacttctccatttcaaaggaaaa
ggcaagtctgaatcagttggaccttcaaatagagaacttgatcctcacttacataaaggc
gatgctgcattggagttcattaaacatatatgtgctgttcttgctctcgatcagaatgtt
cagcatgatattctgagaatgcgaaagaacttgttaaagttggttcgcgtaaaggaattt
gctccagaagcacagttccaagatccctgtgcggcattcatcctcccaaatgtgatttgc
agctattgcaacgactgccgggaccttgatctgtgccgcgactcgacgctccaaggccac
gagtggaggtgcgcggtgccgcagtgcgggcagccataccaccgcgaggagatggagaac
gcgcttctgcagattgtgcggcagcgagagaggctgtaccacctgcaggacctggtgtgc
gtccggtgcaggcaggtgaaggcggcccatgtgtcggagcagtgcaactgtggaggctcg
ttccggtgcaaggaggaggcgccgcagttccttggcaagatgcgggtgttcctgaacgtc
gctgtgagtcagaagttcgagctgctccaggattgcgtccgatggattctggaggtcagg
tga

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