Hordeum vulgare subsp. vulgare (domesticated barley): 123429591
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Entry
123429591 CDS
T11213
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123429591
Spliceosome [BR:
hvg03041
]
Common components
Common spliceosomal components
General mRNP proteins
123429591
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
123429591
NCBI-ProteinID:
XP_044969556
UniProt:
F2EH36
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Position
1H:complement(235647190..235659012)
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AA seq
592 aa
AA seq
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MDFDEYDYLEKAVEPSVPSTNGGGEKDRSSRRRSSTAGGGGRDQEERGSKRPRSGEDRER
HRSGREHRDREDGKEKADREKVREKDEGRDREKVREKDGGRSREKVREKDESRDPEKVRE
KEESRDREKVREKDGSRDREKVREKEREGRDRLMERENGRERRSRSRSERRRGEEEEMVR
ELQRERERSDRHRDYRDRDFRRKKDDGTEPEVDPERDQRTVFAFQLSLKADERDVYEFFS
RAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAIALTGQPLLGQAVMVKPSEAEKNL
AQSNATSGGAASGGARKLYVGNLHSNITEDQLRQVFEPFGQVELVQLPVDPLTGLCKGFG
FIQFARLEDAKAAQSLNGQLDIAGRVIKVSAVTDQGGVQLGTTTGDLDDDEGGGLALNAS
SRALLMRKLDRSGTATSLTGGIGAPGLNSSVGLPAASVLGAPLTAASLLVQPVGAVPGAP
LPIISQSADIGTPTEFLLLKNMFDPSVETDPDFDLDIRDDVQEECSKFGVVKHIFVDKHT
AGFVYLHFDSATAAASAQRSLHGRWFAGKMITATFMTAHQYEMKFPDRAGME
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggactttgacgagtacgactacttggagaaggcagtcgagccgtcagtcccctcaacc
aacggtgggggtgagaaggaccgcagctcgcgccgccgctcctccaccgccggcggcggc
ggtcgcgaccaagaggagcgcggatcgaagcgtcctcgctcgggagaagaccgcgagcgg
caccgcagcggccgtgagcaccgcgaccgggaagacgggaaggagaaggccgaccgcgag
aaggttagggagaaggacgagggccgcgaccgcgagaaggttagggagaaggacgggggc
cgcagccgagagaaggttagggagaaggatgagagccgcgaccctgagaaggttagggag
aaggaagagagccgggaccgagagaaggtcagggagaaggatggcagccgcgaccgtgag
aaggttagggaaaaggagcgggagggtagggacaggcttatggagagggaaaatgggagg
gagcggaggagccgtagccgctcagagcggcgccgtggggaggaggaggagatggtgagg
gagctccagcgggagcgtgaacgcagcgaccgccaccgtgactacagagaccgtgatttc
aggcgtaagaaagatgatggtacagaaccagaagttgacccagaaagagatcaaaggact
gtatttgccttccagctatcgttgaaggcagatgaaagggacgtctatgagttcttctca
agagcagggaaggttcgtgatgtccgccttatcatggaccgaaactcgcggcgttccaaa
ggagttgggtacatcgagttctatgatgtcatgtctgttccaatggcaattgctctaacc
ggtcagccgctcctagggcaagcagtcatggttaagccatcagaggccgaaaagaactta
gctcagtcaaatgcgacatctggtggagcagcttcaggtggagcaagaaagctgtatgtt
ggcaaccttcattccaatatcaccgaggaccagttgagacaggtctttgaaccatttggg
caagtggagcttgtccagctgccggtagatccactcactgggctgtgcaaaggttttggt
ttcattcagtttgcacggcttgaagatgcaaaagctgctcagagtttaaatggccaactt
gatattgctgggagagtaataaaggtctcggctgttactgatcagggcggtgtgcaactt
ggcacaactactggagatttagatgatgacgaaggtggaggcttggcattaaatgcaagc
tctagagcccttctgatgcggaaattggaccgcagtggcactgcaaccagcttaactggt
ggcattggtgctcctggattgaactcatctgttggattgcccgctgcatcagtgcttgga
gctcctctgacagctgcttctcttcttgtacagcctgttggagcagttccaggggcacct
cttcctatcatctctcaatctgctgatattggtacacctactgaattcctattactgaag
aacatgtttgacccatcagtggagacggatcctgattttgatttggatattagagatgat
gtgcaagaggaatgttcgaaatttggtgtagtgaaacatatttttgttgacaagcatact
gctggctttgtgtacctgcattttgatagcgcaacagcagcagcaagtgcgcaacgatca
cttcacggccgatggttcgctggaaagatgattacggcaacctttatgacagcacaccag
tatgaaatgaagttcccagaccgcgcaggtatggaatga
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integrated database retrieval system
