Hordeum vulgare subsp. vulgare (domesticated barley): 123429802
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Entry
123429802 CDS
T11213
Name
(RefSeq) geranylgeranyl pyrophosphate synthase, chloroplastic-like
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00900
Terpenoid backbone biosynthesis
hvg01100
Metabolic pathways
hvg01110
Biosynthesis of secondary metabolites
Module
hvg_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
123429802
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hvg01006
]
123429802
Enzymes [BR:
hvg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
123429802
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
123429802
2.5.1.29 geranylgeranyl diphosphate synthase
123429802
Prenyltransferases [BR:
hvg01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
123429802
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Motif
Pfam:
polyprenyl_synt
UbiA
Prolactin_RP
Terpene_synth_C
DUF3853
Motif
Other DBs
NCBI-GeneID:
123429802
NCBI-ProteinID:
XP_044969726
UniProt:
F2DHB3
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All DBs
Position
2H:140488569..140490251
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AA seq
358 aa
AA seq
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MAAFHPLVASRVRLAAPLLPVAAPAAVVVAAAGPSFHQRRFSAIVAAATAPAATEFDFKA
YMGERAVAVNGALDAAVPAGEPPATLHEAMRYALLAGGKRVRPALCLAACVVSGGREAWA
MAPAAAVEMVHTMSLVHDDLPCMDDDDLRRGKPTCHVMFGEPIAVLAGDALLALAFQHMA
SVDSYPPDVDPAKHTARVVRAIGELARCIGSEGLVAGQVVDLEMTGSTEPVPLDRLEYIH
LHKTAALLEASVVIGAIIGGGSEEQIERLRKYARSIGLLFQVVDDILDVTKSSEELGKTA
GKDLASDKTTYPKLLGLEKSREFAEKLLSDAKEQLAYFEKEKAAPLLYLANYIAYRQN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggcagcgttccacccgctggtcgcctcgcgcgtccgcctcgccgccccgctcctcccc
gtcgccgcgcccgccgccgtcgtcgtcgccgcggccgggccttccttccaccagcgccgc
ttctccgccatcgtcgccgcggcgaccgcccccgcggccaccgagttcgacttcaaggcc
tacatgggggagcgggcggtggccgtgaacggcgccctggacgccgccgtccctgccggc
gagccccccgcgacgctccacgaagcgatgcgctacgcgctgctggccggcggcaagcgc
gtgcgcccggccctctgcctggccgcctgcgtcgtgtccggcggccgcgaggcctgggcg
atggcccccgccgccgcggtcgagatggtgcacaccatgtcgctcgtccacgacgacctc
ccctgcatggacgacgacgacctccgccgcggcaagcccacctgccacgtcatgttcggc
gagcccatcgccgtgctcgccggcgacgccctgctcgcgctcgccttccagcacatggcc
agcgtcgactcctaccctccggacgttgaccccgccaagcacaccgcccgcgtcgtccgc
gccattggtgagctcgcgcgctgcatcggatcagagggcctcgtcgccggccaggttgtt
gatctggagatgactggctcaactgagcctgtaccacttgaccgccttgagtacattcat
ctgcacaagaccgctgcattgcttgaggcctctgtggttattggtgcaatcattgggggt
ggctcggaggagcagatcgagcggttgcgcaagtacgccagatcaattgggttgctgttc
caggtggttgatgacattcttgatgtcaccaagtcatcagaggagctagggaagacagct
gggaaggacttggcgagtgacaagacgacataccccaagttactagggttggagaaatcg
cgggaatttgcggaaaagttgctttctgatgcaaaggagcaacttgcttattttgaaaaa
gagaaggcagcaccgctattgtacttggccaattatattgcctatcggcagaactaa
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