Hordeum vulgare subsp. vulgare (domesticated barley): 123430823
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Entry
123430823 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4-like
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123430823
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123430823
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
123430823
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-C3HC4_2
zf-RING_5
zf-RING_UBOX
zf-ANAPC11
zf-C3HC4_3
Glycophorin_A
zf-RING_16
DUF826
zf_RING_Vps8_fungal
FANCL_C
Motif
Other DBs
NCBI-GeneID:
123430823
NCBI-ProteinID:
XP_044970596
UniProt:
A0A8I6XHW5
LinkDB
All DBs
Position
2H:616222836..616224304
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AA seq
342 aa
AA seq
DB search
MSSSPFPSAPPPRHADDTGTSVLSCILIIVGLLAFVLVASLSISACLRHRSNRSRPSPSP
PPSPPHGTDDGKKDLIDSLPRFTMASALAALPRSSPDCAVCLSPFRPEAELRLLPACRHA
FHAVCVDAWLRTTPTCPLCRATVAPPHPSIAALLAAQQQQQPPPPPEPAAARGRDRSSRF
HFRVEMGSVSSRGGSPAASTGSDDSRTYSLGSFEYHIDEEVEAVVSRMVRAAASADTVKE
EKPAAQGSPSPPGEAVAEAAGTTPRGWLREYMDRLASSASSFSYSFSDRWSSRWSQGQQG
HRQEEPWLWDAEAATVPPPPPPGTDEEVETTFMVLYRWIAAV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgtcccctttcccgtcggctcccccgccgcggcacgccgacgacacaggcacc
tccgtgctctcctgcatcctcatcatcgtcggcctcctcgccttcgtcctcgtcgcctcc
ctctccatcagcgcctgcctccgccaccgctccaaccgctcgcgcccgtctccctctccc
ccgccctcgccgccgcacgggacggacgacgggaagaaggatctgatcgactcgctgccc
cggttcaccatggcgtccgcgctggccgcgctgcccaggagctccccggactgcgccgtc
tgcctctcgcccttcaggcccgaggccgagctgcggctgctcccggcgtgccgccacgcg
ttccacgccgtctgcgtcgacgcctggctccgcaccaccccgacctgcccgctctgccgc
gccaccgtcgcgcccccgcacccctccatcgccgccctcctcgccgcccaacaacagcag
cagccgccgcccccgccggagcctgctgccgcgaggggcagggaccgctccagcaggttc
cacttccgcgtcgagatgggcagcgtcagcagccgcggcgggtcgcccgccgcttccacc
ggaagcgacgacagccgcacgtactcgctcggatccttcgagtaccacatcgacgaggag
gtcgaggccgtcgtgtcccgcatggtgcgcgccgcggccagcgccgacacggtcaaggag
gagaagccagcagcccagggatcgccgtcgccgcccggcgaggcggtggccgaagcggca
gggacgacgccgcgcggctggctgcgggagtacatggaccgcctggcctcctcggcgtca
tccttctcctactccttctcggaccggtggagctcccggtggagccagggccagcagggc
cacaggcaggaggagccgtggctgtgggacgcagaggctgcaacagtgccgccgccgccg
ccgccggggacggacgaggaggtggagacgacgttcatggtgctgtaccggtggatcgcc
gccgtctga
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