Hordeum vulgare subsp. vulgare (domesticated barley): 123430999
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Entry
123430999 CDS
T11213
Name
(RefSeq) probable serine/threonine protein phosphatase 2A regulatory subunit B''delta
KO
K11583
serine/threonine-protein phosphatase 2A regulatory subunit B''
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03015
mRNA surveillance pathway
hvg04382
Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
123430999
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
123430999
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hvg01009
]
123430999
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hvg03019
]
123430999
03036 Chromosome and associated proteins [BR:
hvg03036
]
123430999
Protein phosphatases and associated proteins [BR:
hvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
123430999
Messenger RNA biogenesis [BR:
hvg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
123430999
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
123430999
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_13
EF-hand_7
EF-hand_6
EF-hand_8
EF-hand_1
EF-hand_5
DUF4187
P2R3B_EF-hand
Motif
Other DBs
NCBI-GeneID:
123430999
NCBI-ProteinID:
XP_044970762
UniProt:
F2D9D7
LinkDB
All DBs
Position
1H:275736155..275746497
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AA seq
541 aa
AA seq
DB search
MEVEAARRDASALDPELLQLPELAPGALRENSSIAEALYFQWLVLPESSKLVKSLIEDAK
AGATLNVAGSSASTNAASSSSLPSMFPAGSAPPLSPRSTAGSPRVMRRGSSAGPSSLGSP
LKLVSEPVREVIPQFYFKHGRPPPKDLREQCLSRLDHLFFAGEGLQIQEFRPVIKDICKL
PSYLSGVLFKKIDAACSGTVTRDAFIDYWFNDNKITMDTASQIFEILRKPGYSYLTQEDF
KPVLKELLATHPGLEFLQGTPEFQDRYAETVIYRIFYSINRSGNGHLTLRELKRGNLVAA
MQQLDEEEDINKILRYFSYEHFYVIYCKFWELDTDHDFLIDKENLIRYGNHSLTYRIVDR
VFSQVPRKFTSMTEGKMGYEDFVYFILSEEDKSSEPSLEYWFKCIDLDGNGILTTNEMQF
FYEEQLHRMECMAQEPVLFEDILCQMIDMIGPENETYFTLRDLKRCKLSGNIFNILFNLN
KFMAFETRDPFLIRQERENPTLTEWDRFAHREYIRLSMEEDGEDASNGSGDVWDESLEAP
F
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggaagcggcgaggagggatgcgtcggctcttgacccggagttgctgcagctg
ccggagctcgcgccgggcgctctccgggagaactcaagcatagccgaggcactctatttc
cagtggctcgtgctgcctgagtcgtccaagctggtgaaatctttgattgaagacgcaaaa
gccggtgccacactgaatgttgctgggagctctgctagcacaaatgccgcttcaagtagt
tctttgccgtcaatgttccctgctggtagtgcccccccactctctcctaggagcacagct
ggctctccccgtgttatgagacgaggttctagtgctggaccatcgtccttgggatctcct
ctaaaattagtcagtgaacctgtgagagaagttatacctcagttttacttcaaacatggg
cgccctccaccaaaagatttgagggagcagtgtttgtctagactagatcacctttttttt
gctggggaggggctccagattcaagaattcagaccagttataaaagacatatgcaagttg
ccatcgtacctctctggtgttcttttcaagaagattgacgccgcttgctctggaactgta
acaagggatgcatttatcgattactggtttaatgacaataagataacaatggacacagct
agccagatatttgaaatattaagaaagccaggttacagttatctcactcaggaggatttt
aagcctgttctaaaagaactcctggcaactcacccaggtttagagtttttacaaggcact
cccgagtttcaggacagatacgctgagactgtaatatacagaatcttctactccataaat
agatctggaaatggtcatcttaccctcagagagctaaaacgtgggaatttagtagctgca
atgcaacaacttgatgaggaagaggatatcaacaaaatactgagatatttctcatatgag
catttttatgtaatctactgcaaattttgggagctggacacagatcatgatttcttgatt
gacaaagagaaccttatcagatatggaaatcattcattgacctatagaatagttgataga
gtcttttcacaggtcccaaggaaattcacaagcatgaccgaaggaaagatgggttatgag
gattttgtttacttcatcttgtcagaggaagataaatcatccgagcctagccttgagtac
tggtttaagtgcattgatcttgatggcaatggtattttaactaccaatgagatgcagttt
ttctatgaggagcagttgcatcgtatggagtgcatggcacaggaacctgtactttttgag
gacatactatgccaaatgattgatatgattggaccagagaatgagacatattttacattg
cgggacttaaaaaggtgtaaactctcaggaaatatattcaatatcctatttaatctcaac
aaatttatggcatttgaaactcgtgatccgttcctaattcgccaggagcgtgaaaatcca
accctaactgagtgggatcggttcgcccatagggaatatatcaggctgtcgatggaagag
gatggtgaagatgcttcaaatggaagtggtgatgtgtgggacgagtcacttgaagctcca
ttttga
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