KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123431078
Entry
123431078         CDS       T11213                                 
Name
(RefSeq) SKP1-like protein 1 isoform X1
  KO
K03094  S-phase kinase-associated protein 1
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03083  Polycomb repressive complex
hvg04120  Ubiquitin mediated proteolysis
hvg04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    123431078
   04120 Ubiquitin mediated proteolysis
    123431078
  09126 Chromosome
   03083 Polycomb repressive complex
    123431078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hvg04131]
    123431078
   04121 Ubiquitin system [BR:hvg04121]
    123431078
   03036 Chromosome and associated proteins [BR:hvg03036]
    123431078
Membrane trafficking [BR:hvg04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    123431078
Ubiquitin system [BR:hvg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     123431078
   Cul7 complex
     123431078
Chromosome and associated proteins [BR:hvg03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     123431078
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     123431078
SSDB
Motif
Pfam: Skp1 Skp1_POZ BTB DUF3597
Other DBs
NCBI-GeneID: 123431078
NCBI-ProteinID: XP_044970840
LinkDB
Position
2H:complement(638685624..638690377)
AA seq 178 aa
MASSTESLKKITLKSSDGEEFIVDKTVAMESQTLRHMIEDDCADNAIPLPNVNSKIFSKV
IEYCNQHVQTRPMPADSPVADAAANSSTSAPAAAPAPTVDMKSWDAEFIKVDQATLYDLI
LAANYLDIKGLLDLTCQTVADMIKGKTPEEIRKTFNIENDFTPEEEAEIRKENQWAFE
NT seq 537 nt   +upstreamnt  +downstreamnt
atggcttccagcacagagagcttgaagaagatcacgctcaagagctcggacggcgaggag
ttcatcgtggacaagacagtcgccatggagtcgcagaccctccgccacatgatcgaggac
gattgcgccgacaacgccatcccgctccccaacgtcaactcgaagatcttctccaaggtc
atcgaatactgcaaccagcacgtgcagaccagaccaatgccggccgactcccccgtcgcc
gacgccgccgccaactcctccacctctgccccagccgcggcgccagcccccaccgtggac
atgaagagctgggacgccgagttcatcaaggtcgaccaggccaccctctacgaccttatc
ctggctgcaaattatcttgacatcaagggattactggacctcacttgccagactgtcgcc
gacatgatcaagggcaagactcctgaggagatccgcaagaccttcaacatcgagaatgac
ttcacaccggaggaggaggccgagattcgcaaggagaaccagtgggcttttgagtag

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