Hordeum vulgare subsp. vulgare (domesticated barley): 123431122
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Entry
123431122 CDS
T11213
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like protein 1 isoform X1
KO
K15047
heterogeneous nuclear ribonucleoprotein U-like protein 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
hvg03041
]
123431122
03400 DNA repair and recombination proteins [BR:
hvg03400
]
123431122
Spliceosome [BR:
hvg03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
hnRNP proteins
123431122
DNA repair and recombination proteins [BR:
hvg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
123431122
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
KTI12
Zeta_toxin
AAA_17
AAA_18
6PF2K
Motif
Other DBs
NCBI-GeneID:
123431122
NCBI-ProteinID:
XP_044970893
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Position
2H:641185045..641187838
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AA seq
613 aa
AA seq
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MATRPGGETAQPPPKRPRHHGDHAGPEPARVQLNPADCNLDFDVGAGGLRGEALHGGGFA
YCWSGARATAGVRRGGRYCFGCRVVAEQAVEMDDTEAGQRHLCRVGVSRGDYPVGDLGEA
GGHSFGFGGTRKLSHQGRFFDYGARFGVGDTIVCAVDLDTKSMASIGFAKNGEWLGIAKY
FDASHKGLGLVDAPVRPMQWESAIFPHVLLKNVVVEMQFSREDGLEPIDGYKPWTSAFAD
GNAVFGPVFDEQKECEVMMMVGLPASGKSTWAEKQVREHPEKRFVLLGTNLALDQMKVPG
LLRKNNYGEHFDRLMDHATQIFNTLLDRAAKIPRNYILDQTNVYKSARIRKLRPFANYYK
IAVVVFPSPNELNSRAAKRSKEMGKDVPAEAVDQMTANFVLPLSKDMPGSKEPFDEVIFV
ELSRDDAQINLDEMKRLLPRASAPSHGNVSNQMVSSAYTRTVSAAGPSLSSGVEPPMNYS
AVGEKRMTRLPQEEIDWTLAHVVDGPVPYYYESLKRENPSLLPSPEEQMDSSKVDLYNGA
RALYGVRERFAKYQAFVRAEYEKRGYVEVDDDFLERRARRRAYSDVLCAKAKEYVTQLVH
TGELLVAPRNHHV
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgaggccgggcggcgagaccgcgcagcccccgccgaagcgcccccgccaccac
ggcgaccacgccgggcctgagccggcgcgcgtgcagctcaacccggcagactgcaacctc
gacttcgacgtcggcgccggcgggctgcggggggaggcgctgcacgggggcgggttcgcc
tactgctggtcgggcgcgcgcgcgacggccggggtccggcgcggcgggcggtactgcttc
gggtgcagggtggtggcggagcaggccgtggagatggacgacacggaggccggccagcgg
cacctctgccgcgtcggcgtctccaggggggactaccccgtgggcgacctcggggaggcc
ggcggccacagcttcgggttcgggggcacgaggaagctctcccaccagggcaggttcttc
gattacggcgcaaggttcggggtcggggacaccatcgtctgcgccgtggacctcgatacc
aagtccatggcctcgattgggttcgccaagaacggggaatggcttggcattgccaagtat
tttgatgccagccacaaggggcttggtctggttgatgctcctgtgaggccgatgcagtgg
gagtcggcaatctttccgcatgtgctgctgaagaatgtcgtcgtcgagatgcagtttagc
agggaggacgggctggagccgatcgatggctacaagccctggacctcggctttcgcagat
ggcaatgcggtgtttgggcctgtgtttgatgaacagaaggaatgtgaggttatgatgatg
gttggcctcccggcttcggggaaatctacttgggcagagaagcaggtcagggaacatccg
gagaaacgcttcgtccttcttgggactaaccttgcattggaccaaatgaaggtgccagga
ttgcttcgtaagaacaactatggtgagcactttgaccgtttgatggatcatgccacccag
attttcaacacattgctggacagggccgcaaagatcccccgcaattacattctcgaccaa
acaaatgtgtacaaaagcgcccgtattcgcaagctgaggccatttgcaaactactataaa
attgctgtggttgttttcccatcgccaaatgaactcaattcccgggcagcaaagcgatcc
aaggagatggggaaggatgtaccagctgaagcagttgatcagatgacagccaattttgtc
ttgccactgtcgaaggacatgcctggttcaaaggagcctttcgatgaggtgatttttgtg
gagctttccagggatgatgcccagataaacctagacgagatgaaacgtttgctgccaaga
gcctcagctcccagccatggcaatgtcagtaaccagatggttagctcagcatataccagg
actgtttctgcggcaggaccatctctgtcgtcaggcgttgaaccaccaatgaactactca
gcagtaggcgagaaaaggatgacgcggctgccgcaggaagagatcgattggacccttgcc
catgtggtggatggtcctgtcccttactactacgagtccctgaagcgcgaaaaccccagc
ttgctgccttcacccgaggagcagatggacagctccaaggttgatctctataatggtgcc
cgcgcactctacggcgttcgggagagattcgccaagtaccaggcatttgtccgcgctgag
tatgagaagcgcggctacgtcgaggtcgacgacgacttcctggagcgcagggcgcgccgc
cgggcgtatagtgatgtcctatgcgcaaaggcaaaggaatatgtcacccagttggtccac
actggcgaacttttggttgcaccccgcaaccaccatgtataa
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