Hordeum vulgare subsp. vulgare (domesticated barley): 123431519
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Entry
123431519 CDS
T11213
Name
(RefSeq) probable pectate lyase 8
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00040
Pentose and glucuronate interconversions
hvg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123431519
Enzymes [BR:
hvg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
123431519
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Peptidase_C24
Motif
Other DBs
NCBI-GeneID:
123431519
NCBI-ProteinID:
XP_044971273
UniProt:
A0A8I6WFR5
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Position
2H:complement(5328022..5333998)
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AA seq
477 aa
AA seq
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MADQAAARRRRAALALAGAVSLLLLVVVALSGGADLAGISGGKPRSGGTAASTAKVVVTA
AASGARRWLRDSTSRLAATATARSERTDGSAAVAGAVDDPETVVSQVHMSIRNSTARRNL
GYLSCGTGNPIDDCWRCDSDWHNNRQRLADCGIGFGRNAIGGRDGKIYVVTDAGDDDPVN
PKKGTLRYAVIQDEPLWIIFKRDMVITLSQELIMNSFKTIDGRGANVHIANGACITIQYV
TNVIIHGLHIHDCRPTGNAMVRSSPSHYGWRTIADGDAVSIFGASHVWVDHCSLSNCADG
LIDAIMGSTAITVSNNYFTHHNEVMLLGHSDSYLKDKAMQVTIAFNHFGEGLIQRMPRCR
HGYFHVVNNDYTHWEMYAIGGSAEPTINSQGNRYLAPTNPFAKEVTKRVETAQTTWKAWN
WRSEGDMLLNGAFFTPSGAGASASYSRASSLGAKSSSMVATITSGAGALSCHKGSSC
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccaagcggcagccaggaggaggcgggccgcgctggcgctggcgggggcggtc
tccctgctcctcctcgtcgtcgtcgccctctccggcggcgccgaccttgcgggcatctcc
ggcggcaagcccaggtctggcggcacggccgcgtcgacggccaaggtggtggtgaccgcg
gcggcgagcggcgcgaggcggtggctccgggactccacgtcacggctcgcggcgacggcg
acggcgaggagcgaacgtaccgacggttccgcggcggtggcaggagcggtggatgacccg
gaaacggtggtctcgcaagtgcacatgtcgatcaggaacagcaccgcccggaggaacctg
gggtacctgtcgtgcggcacggggaaccccatcgacgactgctggcgctgcgactcggac
tggcacaacaaccggcagcgcctcgccgactgcggcatcggcttcggccgcaacgccatc
ggcggccgcgacggcaagatctacgtggtcaccgacgcgggcgacgacgaccccgtgaac
cccaagaagggcaccctgcgctacgccgtcatccaggacgagccgctgtggatcatcttc
aagcgcgacatggtcatcaccctcagccaggagctcatcatgaacagcttcaagaccatc
gacggccgcggcgccaacgtgcacatcgccaacggcgcctgcatcaccatccagtacgtc
accaacgtcatcatccacggcctccacatccacgactgccgccccaccggcaacgccatg
gtgcgcagctcccccagccactacgggtggcgcaccatcgccgacggcgacgccgtctcc
atcttcggcgccagccacgtctgggtcgaccactgctccctctccaactgcgccgacggc
ctcatcgacgccatcatgggttccaccgccatcactgtgtccaacaactacttcacccac
cacaatgaggtgatgctcctgggtcacagtgactcctacctcaaggacaaggcaatgcag
gtcaccatagctttcaaccatttcggggaagggctcatccagaggatgccaaggtgcagg
catggttacttccatgtggtgaacaatgactacactcactgggagatgtacgccatcgga
ggaagcgccgagccgaccatcaacagccaggggaaccgctacctcgcgccaaccaaccct
tttgccaaggaggttacaaagagagtcgagaccgcccagaccacatggaaggcctggaac
tggagatcagagggcgacatgctgctgaacggcgccttcttcaccccgtcaggggcaggc
gcgtcggccagctactcgcgcgcctccagcctcggcgccaagtcctcgtccatggtggcg
accatcacatccggcgcgggcgccctgtcgtgccacaagggctcctcctgctag
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