Hordeum vulgare subsp. vulgare (domesticated barley): 123432010
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Entry
123432010 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase RING1-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123432010
04121 Ubiquitin system [BR:
hvg04121
]
123432010
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123432010
Membrane trafficking [BR:
hvg04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
123432010
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123432010
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-C3HC4_3
Prok-RING_1
Anti-TRAP
zf-RING_16
FAR1_N
DAB2P_C
Zf_IFT144_1st
Motif
Other DBs
NCBI-GeneID:
123432010
NCBI-ProteinID:
XP_044971299
UniProt:
A0A8I6X2E4
LinkDB
All DBs
Position
1H:complement(297595142..297601153)
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AA seq
367 aa
AA seq
DB search
MSTPGAAYYASLARKQYFCYQCNRTVLIAASAAAAGELSCPECRGDFLEEVTVPAPTILP
FPFAFPPMMPTASSPSRSSSSSTAAPPSSDLSNFLTSILDLQEGRRVRSRSGSGAASAAG
TATPENEPESFDPLVFFQNYIHTLMEGGANVQVLLDDASVNLAPGLGGRTGGASYGDYFV
GPGLEQLIEQLAENDPNRYGTPPAAKSALSTLPDVVVTDAMVAAAEGAECAVCKEDFSPG
DGAKQMPCKHIYHADCIVPWLELHNSCPICRFELPTDDPDYEGIKASNPQSSVGGGGAAA
SGSSGVAEEGGEESGERVVERRFNVSLPWPFGGLAGQTPQQDGNNAGAGSSSQDSGSQDG
AGGSNKN
NT seq
1104 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaccccgggcgccgcctactacgcttccctcgcgcgcaagcagtacttctgctat
caatgcaaccgcaccgtcctcatcgccgcctccgccgccgccgccggcgagctctcctgc
cccgagtgccgcggcgacttcctggaggaggtcaccgtccccgcccccaccatcctcccc
ttccccttcgccttcccccccatgatgcccaccgcctcctccccgtcccgatcctcctcc
tcctccaccgccgcgcccccctccagcgacctctccaacttcctcaccagcatcctcgac
ctccaggagggccgccgcgttaggtccaggagtggcagcggcgccgcctcggccgctggc
acggccacgcctgagaacgagccggagtccttcgacccactcgtgtttttccagaactac
atccacaccctcatggaggggggcgccaacgtccaggtgctcctggacgacgccagcgtc
aaccttgcccccggcctaggcggccgtaccggtggggcaagctatggggactacttcgtc
ggcccgggactggagcaactcatcgagcagctcgccgagaacgatccgaatcgctacggc
acgccgccggctgccaagtccgccctgtccacccttcctgacgtcgttgtcactgatgcc
atggttgcggcggcagagggcgccgagtgcgctgtgtgcaaggaagatttctcacctgga
gacggggccaagcagatgccctgcaagcacatctatcacgccgattgcattgtaccctgg
ttggagctccacaattcctgccccatttgtcgctttgagctgcccaccgatgatcctgat
tatgagggcattaaggcctcaaacccacagtcatctgttggtggtggtggtgctgctgca
tctgggagctctggtgttgctgaagaaggaggggaggagagtggggagagggtggtggaa
aggagattcaatgtgtcattgccatggccgtttggtggattggcaggtcaaacaccacag
caagatgggaacaatgctggtgctggcagtagctcacaggacagcggttcgcaggatgga
gctggtggtagtaacaaaaattga
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integrated database retrieval system
