KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123432447
Entry
123432447         CDS       T11213                                 
Name
(RefSeq) ubiquitin-40S ribosomal protein S27a-2-like
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03010  Ribosome
hvg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    123432447
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    123432447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:hvg03011]
    123432447
   04121 Ubiquitin system [BR:hvg04121]
    123432447
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:hvg04147]
    123432447
Ribosome [BR:hvg03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    123432447
  Archaea
    123432447
Ubiquitin system [BR:hvg04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   123432447
Exosome [BR:hvg04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   123432447
  Exosomal proteins of colorectal cancer cells
   123432447
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Dsc3_N IBR Plexin_RBD DUF2604 TBK1_ULD UBL_UBAC1 Ubiquitin_5 OTU1_UBXL
Other DBs
NCBI-GeneID: 123432447
NCBI-ProteinID: XP_044971327
UniProt: A0A287FCB1
LinkDB
Position
1H:304932783..304933477
AA seq 162 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGAKKRKKKTYSTPKKVKHEREKTPLAVLGYYRVDDATGKVERLRK
ECPNPDCGAGTFMAAHADRHACGKCGLTYAYAEAQGPEIDSD
NT seq 489 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaagacgctgacggggaagacgatcacgctggaggtggagtcgtcg
gacacgatcgacaacgtcaaggccaagatccaggacaaggaggggatcccgccggaccag
cagcggctcatcttcgccgggaagcagctggaggacgggcgcacgctggccgactacaac
atccagaaggagtcgacgctgcacctggtgctccgcctccgcggcggcgccaagaagcgc
aagaagaagacctactccacgcccaagaaggtcaagcacgagcgcgagaagaccccgctc
gccgtgctgggatactacagggtggacgacgccacgggcaaggtggagaggctgcgcaag
gagtgccccaaccccgactgcggcgccgggaccttcatggcggcgcacgccgaccgccac
gcatgcggcaagtgcggcctcacctacgcctacgccgaggcgcagggcccagagatcgac
agtgattga

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