Hordeum vulgare subsp. vulgare (domesticated barley): 123436237
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Entry
123436237 CDS
T11213
Name
(RefSeq) homeobox-leucine zipper protein ROC3
KO
K09338
homeobox-leucine zipper protein
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123436237
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
123436237
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Cupin_8
Motif
Other DBs
NCBI-GeneID:
123436237
NCBI-ProteinID:
XP_044971552
UniProt:
M0WJB8
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Position
1H:complement(355673942..355680025)
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AA seq
884 aa
AA seq
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MFGDCQVLSSMAAMAAGGSSADALFASPLMPNPGALAGFMSSSSAMPFHHHFSTNLIPKE
EGVMGGLHMAKDEELDLDMEMELSGGSGSGHLDGLLSFADVDDDRDQKPQHSEPDGAGAG
HHPSSSAAAAASNGNGKKKRYHRHTAHQIQQMEALFKECPHPDDKQRLKLSQELGLKPRQ
VKFWFQNRRTQMKAQQDRADNVILRAENESLKTDNYRLQAAIRNVVCPSCGQAAVIGDMS
YEEQNLRIENARLKDELDRLACIASRYGGGRQPGMSSASALSCMSAPPPVLMPPLDLDMN
VYSRHFVEQQHGAMDLMALQQQMASGAHGIAATASYLQGPMTPVVVQEQDKQLVMELAST
AADHLIKMCRTSEPLWARRRGAGSSSGEVMDAEEHARMLSWPIDSGKQQQTDVAHAARTE
GTRDCAVVIMNSITLVDAFLDANKWMELFPSIVCKARTIQVIHHGAASGHLGSGSLILMQ
AEVQFLSPLVPAREVVFFRYCVHNADEGTWSIVDFPADGFQEELLQQQQQQASSLVRCRR
RPSGCIIQDAPNGYSRVVWVEHMEVVGEEKPLQPVFKDHVAGGAAFGATRWVSVLQRQCE
RLASELARSIADQGVIRTPEARTNMMKLSQRMITAFCANISASGSQSWTALSDSTEDTVR
ITTRKNTEPGQPSGVILTAVSTSWLPFSHQQVFELLADEQQRCQLEIMSNGGSLHEVAHI
ANGSHPRNCISLLRINSASNSSQNVELLLQESSIHPDGGSLVVFATVDVDAIQVTMSGED
PSYIPLLPMGFAIFPATSPSPGATSSDTTGNGESSPGNADEPATGCLLTVGMQVLASAVP
SAKLNLSSVTAINSHICNTIHQITTALKGAGGSRTEPAPACSDQ
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atgtttggggactgccaggttctctcgtccatggcggccatggccgcgggcggatcctcc
gccgacgcgctcttcgcctcgccgctaatgcccaacccgggcgcgctcgccggcttcatg
tcttcctcttcagccatgccgtttcatcaccacttctccaccaacttgatacccaaagag
gagggcgtcatgggtgggcttcacatggccaaggacgaggagttggacctagacatggaa
atggagctcagcggcggctccggcagcggccacctcgacggtctgctcagcttcgccgac
gtcgacgacgatagggaccagaagccgcagcacagcgagccggacggtgccggcgcaggc
caccacccctcctcgtcggcggccgcggcggcgtccaacggcaacggcaagaagaagcgc
taccatcgccacaccgcgcaccagatccagcagatggaggcgctgttcaaggagtgcccg
cacccggacgacaagcagcggctgaagctgagccaggagctggggctgaagccccggcag
gtcaagttctggttccagaaccggcgcacgcagatgaaggcacagcaggaccgcgccgac
aacgtcatcctccgcgccgagaacgagtccctcaagacagacaactaccgcctccaggcc
gccatccgcaacgtcgtctgccccagctgcggccaagccgccgtcattggtgacatgtcc
tacgaggagcagaacctccgcatcgagaacgcgcgcctcaaagacgagctggaccgcctg
gcgtgcatcgcgagcaggtacggcgggggtcgccagcccggcatgtcgtcggcttcagcg
ctgagctgcatgtcggcgccgccgccggtgctcatgccgcccctggacctcgacatgaac
gtctactcccggcacttcgtcgagcagcagcacggcgccatggacctcatggctttgcag
cagcagatggccagcggcgctcacggcattgcggccacggcgtcatacttgcaaggccca
atgacgcccgtcgtcgtccaggagcaggacaaacagctggtgatggagctcgcatcaacg
gccgccgaccacctcatcaagatgtgccgcaccagcgagccgctctgggcgcgccgccgc
ggcgccggttcctcgtccggcgaggtcatggacgctgaggagcacgcgcggatgctcagc
tggcccatcgactctgggaagcagcagcagactgacgtcgcccacgcggcgaggactgaa
gggacgcgcgactgtgccgtcgtcatcatgaacagcatcaccttggtcgacgccttcctc
gacgcgaacaagtggatggaattgttcccttcgatcgtgtgcaaggcaaggaccattcag
gtcatacaccacggcgctgcttctggccatctcggcagtggatctctcattctgatgcaa
gcggaggtgcagttcctgtctcctctggtgccggcgcgggaggtggtcttcttccggtac
tgcgtgcacaacgccgacgaggggacctggtccatcgtcgacttcccagcggacggcttc
caggaggagcttcttcagcagcagcagcagcaggccagctcgctggtccggtgccggcgc
cggccctccggctgcatcatccaggacgcccccaatggctactccagggtggtgtgggtg
gagcacatggaggtggtgggggaggagaagcccctgcagccggttttcaaggaccacgtc
gccggcggcgccgctttcggtgccacgaggtgggtttccgtcctccagcgccagtgtgag
cgcctcgccagcgagctcgcccgcagcatcgccgatcaaggagttatccgcacccctgag
gcgaggacaaatatgatgaagctgtctcagaggatgatcaccgccttctgtgctaacata
agtgcatctgggagccagtcttggacggcactatctgattctacagaggacacagtcagg
attacaacaaggaagaatactgagccggggcagcccagcggtgtcatcctcactgcagtc
tccacaagctggcttcctttcagccatcaacaggtgtttgagcttcttgcagacgagcaa
cagcgctgtcagcttgagattatgtcaaacgggggctcacttcatgaggtggcacatatt
gcaaatggatcacacccaaggaattgcatttctcttcttcgcataaattctgcaagcaac
tcatcacagaatgtggagctcctgctgcaggagagcagcatccaccctgatggtggaagc
ctggtggtgtttgcaaccgtggatgtggatgccatccaggtgacaatgagcggggaggat
ccttcctacattcctctacttcccatgggttttgccatcttcccagccaccagcccttca
cctggagccaccagctcagacaccactggcaacggcgaaagtagtcccggcaatgcagat
gagcccgccactggctgcctcctcaccgtcggcatgcaggtgctcgccagcgccgtgcct
tcagccaagctcaacctctcaagcgtcaccgcgatcaacagccacatctgcaacaccatc
caccagattacaacagcactcaagggtgccggaggtagccggactgagccggcgcctgca
tgttccgaccagtag
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