Hordeum vulgare subsp. vulgare (domesticated barley): 123438523
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Entry
123438523 CDS
T11213
Name
(RefSeq) uncharacterized protein LOC123438523
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hvg03016
]
123438523
Enzymes [BR:
hvg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
123438523
Transfer RNA biogenesis [BR:
hvg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
123438523
Prokaryotic type
123438523
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
123438523
NCBI-ProteinID:
XP_044971723
UniProt:
A0A8I6WPQ4
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Position
1H:complement(8355620..8360581)
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AA seq
499 aa
AA seq
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MLRSGRPAVATAAALLLSPAPRFRFLSLTATPYPLYYDLLVHRPVKTPRSAPSDAAAGPP
PPDAEGAGENHPALDRAQRKYLRKRRSRQLPDPDATTGTKPTATSEMVELRPEVVDFPRL
HAREEALYFHDAFAMPWEKDKHYRMLYRLEKKYFPEQSLDNAFVAADAPPQPSDADKGLV
FFEEEEEGKDGVEVGRKAGAADKGEVLERKVEEFFRALKKGPGEGKADDASTSAKKKTVV
GGAARPVKRDAERGGEEDWPRPHLASTRTELPPRWDGPTGTVVLIDKPKGWTSFTVCGKL
RRLVKVQKVGHAGTLDPMATGLLIVCVGKATKVVDKYQGMVKGYSGVFRLGEATSTWDAD
SPVIQRESWEHIKDEDIRKAAASFMGEIWQVPPMFSAIKVGGEKMYDKARRGESIELAPR
RISIYKFDIERSLEDRQNLIFRVTCSKGTYIRSLCADLGKALRSCAHLTALRRDSIGDYS
VNDAWNFDELQEQITKGYL
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgcttcggagcggccgaccggcagtggccacggcggcggcgctgctcctctcgccggcg
ccacgcttccggttcctctccctcaccgccaccccctaccctctctactacgacctcctc
gtccaccgccccgtcaaaacccccagatccgccccctccgacgccgccgctggcccccca
ccgcccgacgcggagggcgccggcgagaaccatcccgctctcgaccgcgcgcagcggaag
tacctccggaagcgccgcagccggcagctcccggaccctgacgccaccaccggcaccaag
ccgacggccacgtcggagatggtggagctgcggccggaggtggtcgacttcccgcggctg
cacgcgcgcgaggaggcgctctacttccacgacgccttcgccatgccctgggagaaggac
aagcactaccgcatgctctaccgcctcgagaagaagtacttcccggagcagtccctcgac
aacgccttcgtcgccgccgacgccccgccgcagccctccgacgccgacaagggcctcgtg
ttcttcgaggaggaggaggaggggaaggatggcgtggaggtcgggaggaaggcgggggcg
gcggacaagggggaggtgctggagaggaaggtggaggagttcttcagggccctgaagaaa
gggcctggtgagggaaaggccgacgacgcttcgacgtcggcgaagaagaagacggtggtg
ggaggggcggcgaggccggtgaagcgggatgcggagagggggggagaagaggactggccg
cggccgcacctcgcgagcacgaggacggagctgccgcctcggtgggacgggccgaccggg
accgtcgtgctcatcgacaagcccaaagggtggacctcatttactgtttgtggaaaatta
cggcggttggtgaaagtgcagaaggttggccatgctggtactctggatcctatggccact
ggattgttgattgtttgtgtgggcaaagcaaccaaagttgttgataaatatcaaggcatg
gttaaaggctatagtggtgttttccggcttggagaagcaacatcaacctgggatgcagat
tcaccagttattcagagggaatcatgggaacacatcaaagatgaagatattagaaaggca
gcagcatcattcatgggtgaaatatggcaagttcctccgatgttttctgccattaaggtt
ggtggtgaaaaaatgtatgataaggcaaggaggggtgaatcgatagagcttgcaccaaga
cgtatatcaatatacaagtttgatatcgagcgcagtttagaagacaggcaaaatttgata
tttcgagttacttgctcgaaaggaacatacattcggtccctctgtgcagacctggggaaa
gcgcttcgaagctgtgctcatttgaccgcccttcggagggactcaattggtgactattcg
gtcaatgacgcttggaacttcgacgaactgcaagaacaaatcaccaagggatacctatga
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