Hordeum vulgare subsp. vulgare (domesticated barley): 123439215
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Entry
123439215 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 7
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123439215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123439215
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123439215
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123439215
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
123439215
NCBI-ProteinID:
XP_044971890
UniProt:
A0A8I6X3D2
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Position
3H:complement(9851348..9853739)
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AA seq
300 aa
AA seq
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MNGSSSNKRSAEAIREGDTWMDVRILKETLDCTICFEHLTTEIYQCSVGHFVCSSCRDKI
LDKKCPTCSIKTSFNRCFGMEHVVQSVAFPCSNAKYGCREGHTYYQKERHEQVCTYAPCF
CPAPDCSFAGPTSELLDHLSIYHVSPCTDLLDSGTVSLSLEPGIHVLSSRSKTTNYFFLL
NMEPEHLGYAISVVCIQPKATEPKFTCNMNYYCSVTGYCQSSSCHIKSSTLSDGLPTDYD
FILPKGKVSVGDQTVVMLRITIHEASSVGRSRVQGNGPTSAPLTPFRCCSDDDADILFTP
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgaacggcagcagctccaacaaaagaagtgctgaagctatcagagagggagacacttgg
atggatgtcagaatattgaaggagacccttgactgcaccatctgtttcgaacacttgacg
actgagatctatcagtgttctgttgggcatttcgtatgctcatcttgccgcgacaagata
ctggacaagaagtgccccacatgctctatcaaaacttccttcaaccgctgctttgggatg
gaacatgtcgtccagtcagtcgcatttccttgctccaatgccaagtatggatgcagagag
ggtcacacctactatcagaaagaaaggcatgaacaggtatgcacgtatgccccatgcttc
tgcccagcgcctgactgcagctttgctggaccaacatcagagctcctggaccatcttagc
atctatcacgtgtctccatgtacagacctcctggattctgggacggtgtctctcagcttg
gaaccgggcatacatgttctgtcatcccgtagcaagaccaccaactattttttcttgctc
aacatggaaccagagcatcttggttatgctatctcagttgtatgcatccaacctaaagct
acggaacccaagttcacatgtaatatgaattactactgctccgtgacaggttattgtcaa
agttcaagttgccacataaaaagctctacactctctgacgggctaccgacggactatgac
tttattctgcctaagggaaaagtttcagttggtgatcaaactgttgtcatgctcagaatc
accattcatgaagcttcaagtgttggcagatcccgtgttcaaggaaatggcccgacttct
gctccattgaccccgtttcgttgttgttctgatgatgatgctgatatactcttcacgccg
tga
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