Hordeum vulgare subsp. vulgare (domesticated barley): 123439218
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Entry
123439218 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase SINA-like 2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123439218
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123439218
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123439218
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123439218
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_RING
Sina_ZnF
RecO_C
Motif
Other DBs
NCBI-GeneID:
123439218
NCBI-ProteinID:
XP_044971893
UniProt:
A0A8I7B4K2
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Position
3H:9903951..9905810
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AA seq
290 aa
AA seq
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MEAKSDIINKEGEGKQNVTMRMDVFNCSICSKPLGPPIFQCSKGNSICSACCEQLPESKR
AAVHRCYIMERVVDNMFVSCKHGCGRKMTYYRQDTHERECPIGPCMCPVSGCGFVAPAVV
LLDHLTTLHKLPTTQVELFMMFHLPVQAGSQVLCSRNGRLFLLEMASLGSFGHAVFLVCV
RPETPRATVDAFVEFSCFEGHFHASKLKIIPDGEPRQCLCVVPAGREISVHIGISIWMEY
LDNDELQEEEEKEMDELDDAFQEFDYDFDQDEEDDAVQEYGSDFDEEEDD
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgaagagtgacatcatcaacaaggaaggagaagggaagcaaaatgtcaccatg
aggatggatgtgttcaactgctccatctgctctaagcccctcgggcctcccattttccag
tgttctaaggggaattccatctgctcggcttgttgcgaacaactcccggaaagcaagcgt
gctgctgtccatcgctgctatatcatggagcgtgtcgtcgacaacatgttcgtttcttgc
aaacacggatgcggaaggaagatgacctactacaggcaggacacacacgagagggagtgc
ccgatcgggccgtgcatgtgcccagtctccggctgcggcttcgttgcgccagccgtcgtg
cttctggaccatctcaccaccctacacaagttgccaacaacgcaggtcgaattattcatg
atgtttcacctcccagtccaggctggctctcaagttctctgcagcagaaacggtcgcctc
ttcctgcttgagatggcgtcgcttgggtcctttggccatgcggtcttcctcgtttgtgtt
cggccagagactccccgggccacagtggatgcctttgtggagttctcttgctttgaagga
cactttcatgcctcaaagcttaaaatcataccagatggggaaccaaggcaatgcttgtgt
gtcgttcccgccggcagagaaatcagtgtccatattggcatcagtatatggatggagtac
cttgacaacgatgagctgcaggaggaggaggagaaggagatggatgagttggatgacgct
ttccaagagttcgactatgacttcgaccaggatgaggaggatgacgctgtccaagagtac
ggatccgactttgacgaggaggaggatgattga
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