Hordeum vulgare subsp. vulgare (domesticated barley): 123439563
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Entry
123439563 CDS
T11213
Name
(RefSeq) polygalacturonase ADPG2-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg00040
Pentose and glucuronate interconversions
hvg01100
Metabolic pathways
Module
hvg_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
123439563
Enzymes [BR:
hvg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
123439563
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
123439563
NCBI-ProteinID:
XP_044972194
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Position
3H:complement(79661107..79663285)
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AA seq
358 aa
AA seq
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MAFHAAGDGETDDTKAFEETWNSACRDSGGANVYIPAGRTFLLRDATFSGPCRSPITVQV
DGDIVAPKTLWQLKSSNILTFHEVDNLTVDGSGQIDGRGAPWWDCHNHKLVAFSFCNGLR
VTNIRLKDSAEKHISMYKCSHAQVNNVSITAPGDSPNTDGITMGGCSHVHISSCSIQSGD
DCVSILTGTTDVNVTDITCGPGHGISVGSLGADGEGPAMVESVTVSNCNFFNTMNGVRIK
SWQGGEGKANGFIFRDLNMTEVQYPIDIDQFYCPHGNCPERQGGVAITDARFINIQGTSS
EREAIKIICSKSVPCHDIHLDNVDISWCRHTAAPQAKVLNAHGSVTGRVKPQVRFSGR
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggctttccatgccgctggggacggcgagacggatgataccaaggcgttcgaggagaca
tggaactcagcgtgcagagacagcggcggggcgaacgtgtacatccctgcaggaaggacc
ttcttgctgcgcgacgccactttcagtggaccctgcaggtcgcccatcaccgtccaggtg
gacggggacatcgtggcgccaaaaactctctggcagctaaaatcgtcaaacatactgacc
ttccacgaggtcgacaacctgacggtggacgggagcggccagatcgacggccgaggcgcc
ccctggtgggattgccacaaccataagctggtggcattctcgttctgcaacggtctacgg
gtgaccaacatacgcctcaaggacagcgccgagaagcacatcagcatgtacaagtgcagc
cacgcgcaggtgaacaacgtctccatcaccgcccctggcgacagccccaacactgacggg
atcaccatggggggctgcagccatgtgcacatctcctcctgctccatccagtccggcgat
gactgtgtgtcgattctgacgggcacgaccgatgtcaacgttaccgacatcacgtgtggg
cctggtcatggcattagtgtgggaagccttggagctgatggtgaaggcccagcgatggtg
gagagtgttactgtatccaactgcaacttctttaatacgatgaacggtgtcaggatcaaa
tcgtggcagggaggggaaggcaaagcgaacggattcattttcagggacctcaacatgact
gaagtccaatatcctatcgacattgaccagttctattgcccccatggaaactgtccagaa
cggcagggtggtgtggccataacggatgcaaggttcatcaacatccaggggacgtcctcc
gagcgagaggccatcaagatcatatgcagcaaaagcgtgccgtgccacgacatccatctc
gataacgtcgacatatcctggtgtaggcacactgccgcaccgcaagccaaggttctgaat
gcccatgggagcgtcacgggcagggtgaagccacaagtacggttctcgggccgttga
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