Hordeum vulgare subsp. vulgare (domesticated barley): 123439716
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Entry
123439716 CDS
T11213
Name
(RefSeq) zinc finger protein MAGPIE-like
KO
K25870
zinc finger protein IDD3/4/5/6/7/8/9/10/11/12/13
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123439716
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
123439716
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GFIT
Motif
Pfam:
C2CH-4th_BIRD-IDD
C2H2-2nd_BIRD-IDD
C2CH-3rd_BIRD-IDD
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-C2H2_6
zf-C2H2_STOP2_C
zf-met
Motif
Other DBs
NCBI-GeneID:
123439716
NCBI-ProteinID:
XP_044972338
UniProt:
A0A8I6X0A8
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Position
3H:154125736..154127767
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AA seq
480 aa
AA seq
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MASEAIPNPFAPLTNHNQPQQQPSSHEHPPAPPPKKKRNLPGTPDPDAEVIALSPRTLMA
TNRFVCEICGKGFQRDQNLQLHRRGHNLPWKLRQRSGKEPRKRVYVCPEKSCVHHNPSRA
LGDLTGIKKHFCRKHGEKKWKCDKCAKRYAVQSDWKAHSKTCGTREYRCDCGTLFSRRDS
FITHRAFCDALAEETARLTAATSGAAAASVLPSMCGGGQGYLFARPNSMMLQPPLAAHLK
PAAGGQMLGDPLCDGAAARHGGLSLWGNDNTVPSSMGHHVGSLLSAGGGGAPMPMQMYAD
LFAPSSGAPPQFDMAQLSWLYGNNGKLSSSNASELTTNSSREADSAPSVFSGQQHAKPAA
APTDMSATALLQRAAQIGSVTSSNASMPLEGAFEQAPNSAGRINEHNKFDDRAPFGASQH
NAIDPSAMSELTAATGNVPYDVFSSARHAALRDAVGREETRDFLGVGMQALCSSSIHGWI
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atggcgagtgaagccatacccaaccctttcgctcctctcaccaaccacaaccagccgcag
cagcaaccgtcgtcccatgaacaccctcccgctcctcccccgaagaagaagcgtaatctc
ccaggcacaccagaccctgacgcggaggtgatcgcgctgtcgccgcggacgctgatggcg
acgaaccggttcgtgtgcgagatctgcggcaaggggttccagcgcgaccagaacctgcag
ctgcaccgccgcggccacaacctcccctggaagctgcggcagcggagcggcaaggagccg
aggaagcgcgtctacgtctgccccgagaagagctgcgtccaccacaacccgtcccgcgcg
ctgggcgacctcaccgggatcaagaagcacttctgccgcaagcacggcgagaagaagtgg
aagtgcgacaagtgcgccaagcgctacgccgtgcagtccgactggaaggcccactccaag
acctgcggcacgcgcgagtaccgctgcgactgcggcaccctcttctccaggcgggacagc
ttcatcacgcaccgcgccttctgcgacgcgctcgccgaggagacggcacggctcacggcc
gccacttcgggcgccgccgcggcgtctgtgctaccgtccatgtgcggcggcgggcaggga
tacctcttcgccaggcccaacagcatgatgctccagccgccgctcgccgcgcacctcaag
cctgctgcaggagggcagatgctcggggacccgctctgcgacggcgccgcggcgaggcac
ggagggctctcgctgtggggcaacgacaacacggtgccgtcctccatgggccaccacgtt
ggcagtctcctgtcggccggtggcggcggcgcgccaatgccaatgcagatgtacgcggat
ctcttcgcgccgagctccggcgcgccgcctcagttcgacatggcgcagctgagctggctg
tacgggaacaacgggaagctctcgtcatctaacgccagcgagctgacgactaactcctcg
agagaggcggacagcgcgccttccgtgttcagcggccagcagcacgcgaagccggccgcg
gcgcccaccgacatgtcagcgacggcgctgctgcagagagccgcgcagatcggctccgtc
acgtcctccaatgcctccatgccgctggagggggccttcgagcaggcgcccaactccgcc
gggcggatcaacgagcacaacaagttcgacgacagagctcctttcggcgcgagccagcac
aatgcgatcgaccccagcgcaatgagcgagctcacggcggccaccgggaacgtgccgtac
gacgtgttctcgtcggcgcgacatgctgccctcagggacgccgtcgggagggaggagact
agggacttcttgggagtcggcatgcaagcactctgctcatcttcgatacatgggtggatt
tag
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