Hordeum vulgare subsp. vulgare (domesticated barley): 123439787
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Entry
123439787 CDS
T11213
Name
(RefSeq) transcription factor CSA-like
KO
K09422
transcription factor MYB, plant
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123439787
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
123439787
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Myb_DNA-bind_7
DUF6581
Motif
Other DBs
NCBI-GeneID:
123439787
NCBI-ProteinID:
XP_044972397
UniProt:
A0A8I6X0T8
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Position
3H:complement(199555243..199557247)
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AA seq
330 aa
AA seq
DB search
MAREMNGFFSHPPPPAPAPAPYQEEQEEAVADVDEAEDGSGGQGKLCSRGHWRPAEDARL
KELVGQYGPQNWNLIAEKLDGRSGKSCRLRWFNQLDPRINRRAFTEEEEDRLMAAHRAYG
NKWALIARLFPGRTDNAVKNHWHVLMARRQREQSGAFRRRSKPASSSSSSIAPAPHYPAV
VLQHQHQHQYQLHGHGASPMPLQPFAMGVAIASGVYSKPATASRAYSGGESDESASTCTT
DLSLSSGSAAVPCFYHHHHHQGYDMSPQAHAVAQAFAASPRSAFSAPSSSSARQQQRRQQ
QYEEEASGAAGQDGDKLSVPFFDFLGVGST
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcgagatgaatggcttcttcagccaccctccgcctcctgctccggctccggcg
ccgtaccaggaggagcaggaggaggcggtcgcggacgtggacgaggcggaggacggcagc
ggcgggcaggggaagctctgctccaggggccactggaggcccgccgaggacgccaggctc
aaggaactcgtcggccagtacggcccccagaactggaacctcatcgccgagaagctcgac
ggcagatcagggaagagctgccgcctgcggtggttcaaccagctggacccgcggatcaac
cgccgggccttcacggaggaggaggaggaccggctcatggcggcgcaccgcgcctacggc
aacaagtgggccctcatcgcccgcctcttccccggacgcaccgacaacgccgtcaagaac
cactggcacgtcctcatggcccgcaggcagcgggagcagtccggcgccttccgccgccgc
agcaagcccgcatcttcctcctcctcctccatcgccccggcgccgcactacccggccgtc
gtcctccagcaccagcaccagcaccagtaccagctccacggccacggggcatctcccatg
ccgctccagcccttcgccatgggggtggcgatagcaagcggggtgtacagcaagccagcc
acggccagccgcgcctacagtggcggcgagtccgacgagtcggcgtccacctgcaccacc
gacctctcccttagctccggcagcgccgccgtcccctgcttctaccaccaccaccaccac
cagggctacgacatgtctccgcaagcgcacgcggtggcccaggcgttcgcggcgagccct
cgctccgccttctccgccccgtcgtcgtcgtcggcgcggcaacagcagcgcagacagcag
cagtacgaggaggaggctagcggcgccgccgggcaggatggcgacaagctgagcgtcccc
ttcttcgacttcctgggcgtgggctcgacatga
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