Hordeum vulgare subsp. vulgare (domesticated barley): 123439988
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Entry
123439988 CDS
T11213
Name
(RefSeq) heat stress transcription factor C-1a-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hvg03000
]
123439988
Transcription factors [BR:
hvg03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
123439988
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
CC_Bre1
NUDE_C
Cwf_Cwc_15
PSME4_C
DUF16
Motif
Other DBs
NCBI-GeneID:
123439988
NCBI-ProteinID:
XP_044972518
UniProt:
A0A8I6XEH9
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Position
3H:381999447..382000980
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AA seq
327 aa
AA seq
DB search
MDSLHTELALGLIGCGHGDFQTAPFVAKTYQMVCDPRTDALVRWGKGNNSFLVPDVAGFS
QLLLPCFFKHGNFSSFVRQLNTYGFRKVHPDRWEFAHESFLRGQTHLLPRIVRRKKRGEA
GVGASCSSAVGGAEQHQHVVANMGDEVEEEEEEEESEALLEEVQRLRKEQTAIGEQLAKM
SRRLQATERRPDRLMSFLARLAEDPSATSLHLLEQAAEKKRQRMQFPSRDFTSLPIALPL
QPAPSPPPPPLLALGDAAMGGVRVWQWAEPIPLKLTTFEQPSASSGVQQVPEFESGRSGS
GSGMGLTDGGTAVETPFPFCLLGQCFF
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggacagcctccatacggagctcgcgctggggctgatcgggtgcggccacggcgatttc
cagacggcgccgttcgtggccaagacgtaccagatggtgtgtgaccctaggacggacgct
ctcgtcaggtgggggaagggcaacaacagcttcctcgtcccggacgtcgccggcttctcg
cagctcctcctcccctgcttcttcaagcacggcaacttctccagcttcgtccgccagctc
aacacatatggcttccggaaggtgcacccggaccgatgggagttcgcgcacgagtcgttt
ctgcgcggccaaacgcacctgctgccgcgcatcgtgcgccgcaagaagcgcggcgaggcc
ggtgttggcgcctcctgctcctctgcagtcggcggcgctgagcagcaccagcacgtggtg
gccaatatgggagacgaagtggaggaggaagaggaagaggaggagagtgaggcgctgctt
gaggaggttcagaggctgcggaaggagcagacggctatcggggagcagctggcgaagatg
agccggcgactgcaggcgacggagcggcggcctgaccggctcatgtccttcctcgcccgg
ctcgccgaggatcccagcgccacctcgctccaccttctcgaacaggcagccgagaagaag
cgccagcgcatgcagttcccttcccgtgattttacttccttacccatcgcgcttcctctt
cagcccgcaccttcaccgccgccgccaccgctattggcgctcggcgacgcggccatgggc
ggggtcagagtctggcaatgggcggagccgataccactgaaactcacaaccttcgagcag
ccctccgcgagctctggggtgcagcaggtgccggagttcgagagcggccgcagcggcagc
ggcagcggcatgggcctaactgacggtgggaccgcggtggagacccccttcccgttctgc
ctacttggacagtgtttcttctaa
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integrated database retrieval system
