Hordeum vulgare subsp. vulgare (domesticated barley): 123440338
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Entry
123440338 CDS
T11213
Name
(RefSeq) cyclic nucleotide-gated ion channel 4-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
123440338
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
hvg04040
]
123440338
Ion channels [BR:
hvg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
123440338
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GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
GlcNAc
Motif
Other DBs
NCBI-GeneID:
123440338
NCBI-ProteinID:
XP_044972844
UniProt:
A0A8I6Y1W0
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Position
3H:complement(511249684..511253373)
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AA seq
669 aa
AA seq
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MPTGLSVPRSSSSSPSSSSAAASPHGGLYRPGGEREKRTPSGGKRGRRLAAIGPRARWAR
EWDRAYLLACAAGLMVDPLFLYAVSVSGPLMCVFLDGWFAAAVTALRCMVDALHAWNLLL
RLRTACAPGQEEEDDGDGDEEAQRVGGAAAPARLPRSKKGGLLLDVFVILPVMQVVIWMA
IPAMIRAGSTTSVMTVLMVSFLFEYLPKIYHSVRFLRRMQNVAGYIFGTIWWGIALNLMA
YFVAAHAVGACWYLLGAQRATKCLREQYCAGSSGAGCAAGALACAEPLYYGGASRLVGAD
RLAWGRNASARATCLDSGDEYQYGAYKWTVMLVANPSRLEKILLPIFWGLMTLSTFGNLA
STTEWSEIVFNIVTITGGLILVTMLIGNIKVFLNATTSKKQAMHTRLRSVEWWMKRKNLP
QSFRHRVRQQERQRWAATRGVDECRIVRDLPEGLRRDIKYHLCLDLVRQVPLFHHMDDLV
LDNICDRVKSLVFPKGEVIVREGDPVRRMVFIVRGHLESSQALRNGGTSCCMLGPGNFSG
DELLSWCLRRPFQERLPAASSTLATLESTEAFGLEAGDVKYVTQHFRYTFANEKVRRSAR
YYSHGWRTWAAVAVQLAWRRYKHRKTLTSLSFIRPRRPLSRCSSLGEEKLRLYTALLTSP
KPNQDDLLL
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgccgaccggcctctccgtgccgcgctcctcgtcgtcctcgccatcttcctcctccgcc
gccgcgtcccctcacggcggactgtacaggccgggaggcgagcgcgagaagaggacgccc
tcaggcggcaagcgcgggcggcggctggcggcgatcgggccgcgggcgaggtgggcgcgg
gagtgggaccgggcgtacctcctggcgtgcgcggcggggctcatggtcgacccgctcttc
ctctacgccgtgtccgtcagcggcccgctcatgtgcgtcttcctcgacggctggttcgcc
gccgcggtcaccgcgctccggtgcatggtggacgccctgcacgcctggaacctgctgctg
cggctccggacggcgtgcgcgcccggacaggaggaggaggacgacggcgacggcgacgag
gaggcgcagcgcgtcggcggcgccgcggcgccggctcggctgccgaggtccaagaaaggg
ggcctcctcctggacgtgttcgtcattcttccggtgatgcaggtggtgatctggatggcg
ataccggcgatgatacgcgcggggtcgacgacgtcggtgatgacggtgctgatggtgtcg
ttcctgttcgagtacctgcccaagatctaccactcggtccgcttcctccgccggatgcag
aacgtcgccggctacatcttcggcaccatctggtggggcatcgcgctcaacctcatggcc
tacttcgtcgccgcccacgcggtgggcgcgtgctggtacttgctcggggcgcagcgggcc
accaagtgcctgagggagcagtactgcgccgggagcagcggcgccgggtgcgcggccggc
gcactggcgtgcgcggagccgctctactacggcggcgccagcaggctggtgggcgcggac
aggctcgcctggggccgcaacgccagcgccagggcgacgtgcctcgacagcggcgacgag
taccagtacggcgcctacaagtggaccgtcatgctcgtcgccaaccccagccggctcgag
aagatcctcctccccatcttctggggcctcatgacactcagcacgtttgggaacctggcg
agcacgacggagtggtcggagatcgtgttcaacatcgtcaccatcaccggcggcctgatc
ctcgtcaccatgctgatcgggaacatcaaggtgttcctgaacgcgaccacgtccaagaag
caggcgatgcacacgcggctgcggagcgtggagtggtggatgaagcgcaagaacctgccg
cagagcttccggcaccgcgtgcggcagcaggagcggcagcggtgggcggcgacgcggggt
gtcgacgagtgccgcatcgtgcgcgacctccccgagggcctccggcgggacatcaagtac
cacctctgcctcgacctcgtccgccaggtgccgctcttccaccacatggacgacctcgtg
ctcgacaacatctgcgacagggtcaagtccctcgtcttccccaagggagaagtgatcgtg
agggaaggcgacccggtgcggaggatggtgttcatcgtgcgggggcacctggagagcagc
caggcgctgcggaacggcgggacgagctgctgcatgctggggccggggaacttcagcggg
gacgagctgctgtcgtggtgcctgcggcggccgttccaggagcggctgccggcggcgtcg
tcgacgctggcgacgctggagagcacggaggcgttcgggctggaggcgggggacgtcaag
tacgtgacgcagcacttccgctacaccttcgccaacgagaaggtgcggcggagcgcgcgc
tactactcgcacgggtggcgcacctgggcggccgtggcggtgcagctcgcgtggcggcgg
tacaagcaccgcaagacgctcacctcgctctccttcatccggccgcggaggccgctgtcc
aggtgctcctcgctcggggaggagaagctgcggctctacaccgcgctgctcacctcgccg
aagcccaaccaggacgacctgctgctctga
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