Hordeum vulgare subsp. vulgare (domesticated barley): 123440367
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Entry
123440367 CDS
T11213
Name
(RefSeq) E3 ubiquitin ligase PARAQUAT TOLERANCE 3-like
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123440367
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123440367
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
U-box type E3
123440367
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
123440367
NCBI-ProteinID:
XP_044972872
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All DBs
Position
3H:complement(515855046..515856443)
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AA seq
465 aa
AA seq
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MAVHYKYSSARGTFSLPLAAPSISVGDLRRLIMETGRSGHGRTRGRGPRETITISNGQTL
EEYADDNALVLRNSTVVVARRVAGPPADTIVARPYDEPPLCPRSRQVGGDPSSYSAMRSA
GTEEDEAKAISAVIDGAEPKWEGSYDHRGAAHNGRAPPAGYVCHRCRVPGHFIQHCPTNG
DSRFDFGGTPVVAPRPVDESNDDGFPADLHCKICKEVMADAVVASKCCFGSFCGRCIRAH
IVANSKCACGAKASADDLVPNLTVRTTISNILAARASSSSGGAEKQRSSVSSNEVAASTH
QTQSPAASQGSSSMSSHASSKKGATLESEHSEYASKSTSAPAAHEPRKKQETTDTAASHV
DHQHGFSVPFAPACYDPFFGGMPWSADPSMYYGHAGMPYAYGGGYPMGSHHVNAMGGNMT
VPPPTRNDGGPYGYPGRKRTSTDYEDQSFKRRCGGGRSQAALVLT
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcactacaagtacagcagcgcccgtggcacgttctccctgccccttgccgcg
ccttccatctccgtcggcgacctgaggcgccttatcatggagacaggccgctctggtcat
ggccggacacgcggccggggtcccagggagaccataacgatctccaacgggcagaccctt
gaggagtacgcggacgacaacgcattggtcctgcgtaactcgacggtggtggtggcgcgc
cgagtggctgggcctccggccgataccatcgtggctaggccatacgacgaaccccctcta
tgcccgagatcgaggcaagtcggcggtgatccatcctcgtactcggccatgaggtcggcc
ggaacagaggaggacgaggctaaggctatcagcgcggtgatcgacggcgcggaaccaaag
tgggagggctcctatgatcaccgtggagcagcgcacaacgggcgggcgccgccggccggg
tacgtgtgccacaggtgccgcgtcccgggccacttcatccaacactgccccacaaacggc
gactcgagattcgactttggagggactcccgtggttgcccctcggccggtcgacgagagc
aacgacgacggcttcccggcggatctccactgcaagatttgcaaggaggtgatggccgac
gcggtggtggcgagcaagtgctgcttcggcagcttctgcggccggtgcatcagagcgcac
atcgtcgccaactccaagtgcgcttgcggggccaaggcgagcgcggacgatctggtcccc
aacctcacggtgcgcaccaccatctccaacattctcgccgccagggccagcagctcttca
ggtggagcagagaagcagaggagctccgtctcaagcaacgaggtcgcggcgtccacgcat
cagactcaaagtccggcagcatcgcaggggagcagcagcatgagcagccacgcgtcttcc
aagaagggcgccaccttggagtcggagcacagcgagtacgcaagcaaatcgacgtcggct
ccagcggcgcacgagccaaggaagaagcaggagacaacggacacagcggccagccatgtc
gatcatcaacacggcttcagcgttcccttcgccccggcgtgctacgatcctttttttggt
gggatgccgtggtcggctgatccttccatgtactacggccacgccggcatgccctacgct
tacggtggcggttatccgatggggtcgcaccatgtcaacgccatgggaggcaacatgaca
gtgccaccacctacgcggaatgacggcgggccgtatggctaccccggcaggaagaggacg
agcacagattatgaggatcagagcttcaagagaaggtgcggtggaggcagatcacaggcc
gcgttagttttgacgtag
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