Hordeum vulgare subsp. vulgare (domesticated barley): 123440694
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Entry
123440694 CDS
T11213
Name
(RefSeq) probable histone acetyltransferase HAC-like 1
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123440694
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123440694
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123440694
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-C3HC4_4
zf-RING_UBOX
zf-P11
zf-rbx1
zf-RING_10
RING_XB3-XBAT31
Prok-RING_4
TerY_C
zf-RING_4
zf-RING_6
AIR2-like_ZnK4
zf-Nse
Motif
Other DBs
NCBI-GeneID:
123440694
NCBI-ProteinID:
XP_044973185
UniProt:
A0A8I6WVP5
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All DBs
Position
3H:572681705..572683749
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AA seq
252 aa
AA seq
DB search
MNRLVGSGIGSADVPPPQHQQMEDVMGLSDPMLLELRNNYRQRIIEYARKAVIARLDARS
RTPADWQRRLPELAWRVEKVLFEKHPNKREYYNMTNGPVQTHFEFAVTAALAQIQRQEHG
RNQQMSRQRASPTAYAPGGMIPAPGVTQGEAPNEHVNTVLSLGINSSDAHSEVSNSLLAV
CAPVNKEVSKEPKFSCPFCFDELVDASSTNCGHIFCLECIKTSIQAQNRCPACWRALTMN
SFHRVYLPATMD
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggttagtcggcagtggcattggcagcgcagacgtgccaccgccgcagcatcag
cagatggaggatgtgatgggcctcagcgatcccatgctactggagctgcgcaacaattac
cgccagaggataattgagtatgcaagaaaggcggtaattgccagattagatgcacgatcg
aggacaccagctgactggcagcggcggctgcctgaacttgcttggcgggtcgagaaagtc
ttgtttgagaaacaccccaataagagggagtactacaacatgacgaatggaccagttcag
acacattttgagtttgctgtcacagccgcgcttgctcagattcagaggcaagaacatgga
cgaaaccagcaaatgtcaaggcagagagcatctcccacagcctatgctcctgggggcatg
atcccggcacctggtgtcacgcaaggggaagcccccaacgagcatgtgaacacggtacta
tctctgggaataaactctagtgatgctcactcggaagtgtccaacagcctcttggcagtc
tgtgcacctgttaataaggaggtctcaaaggaaccaaagttcagctgtccattctgcttc
gacgagctggtcgatgcgtcatcgactaactgcggccacatcttctgcctggaatgcatc
aagacctccatccaggctcagaataggtgccctgcctgctggagggcactcaccatgaac
agcttccaccgggtctacctccctgctacgatggactaa
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integrated database retrieval system
