Hordeum vulgare subsp. vulgare (domesticated barley): 123440698
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Entry
123440698 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase RNF220-like
KO
K22651
E3 ubiquitin-protein ligase RNF4 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123440698
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123440698
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123440698
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_2
zf-RING_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-rbx1
Prok-RING_4
Zn_ribbon_6
zf-RING_10
TerY_C
zf-RING_4
Zn_ribbon_FGT1_2
Sina_RING
Rad50_zn_hook
ELL
zf-Nse
zf-ANAPC11
zf-Di19
Motif
Other DBs
NCBI-GeneID:
123440698
NCBI-ProteinID:
XP_044973188
LinkDB
All DBs
Position
3H:573006785..573008311
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AA seq
249 aa
AA seq
DB search
MSADWWRRLPELVIRLEEILFRKHRNKTEYFNMAKGSIQPYLHFALRALNAHQNQKQQQR
QQSSVQTASSPGCITQGASGTSGMSYVTYNMDLSSSAGLVPQNATMGTSLPGGAPDNHVN
TMLTLGINPTQHDCSTESNNNNDKLVRTLCYVLHIPNVVVNVSLNIYLTLQAKVAEAHAA
PLIKDLPREPKFSCPVCMNELVDASSTICGHIFCQKCIEASIKAQKKCPTCRRKLTMRSF
HRVYLPMMD
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctgactggtggcggcggctgccagagctcgtgatccggctcgaggaaatcttg
tttaggaaacaccgaaacaagacggagtacttcaatatggcgaaggggtcaattcagccg
tacttgcactttgctctccgggcattgaatgctcatcagaaccaaaaacagcaacaaaga
cagcaatcgtcagtacagacagcatcttcccctggctgtatcacccaaggtgcaagtgga
acttctggaatgtcttatgtaacatacaacatggatctttcatcttcagcaggcttggtt
ccacagaatgccaccatgggtacctcgctgccagggggagctcctgataaccatgtgaac
acaatgctgactctcgggataaaccctacacaacatgattgttctacagagtccaacaac
aacaatgacaagctcgtaagaactctatgctatgttttacacataccaaatgtggtagtt
aatgttagcctaaacatttatttaacactgcaggccaaggtggcggaggcacacgcggcg
cctcttataaaggatctcccaagggaaccgaaattcagctgcccagtctgcatgaacgag
ctggtcgatgcgtcatcaactatctgcggccacatcttctgccagaagtgcatcgaggcc
tccatcaaggcacagaagaagtgccctacctgtcgtaggaagctgaccatgagaagtttc
caccgcgtctacctcccgatgatggactga
DBGET
integrated database retrieval system
