Hordeum vulgare subsp. vulgare (domesticated barley): 123441222
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Entry
123441222 CDS
T11213
Name
(RefSeq) probable protein transport Sec1b
KO
K15292
syntaxin-binding protein 1
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123441222
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123441222
Membrane trafficking [BR:
hvg04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
123441222
SNARE
SNARE associated proteins
Syntaxin-binding proteins
123441222
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
123441222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
Motif
Other DBs
NCBI-GeneID:
123441222
NCBI-ProteinID:
XP_044973648
UniProt:
F2EHJ5
LinkDB
All DBs
Position
3H:619419017..619428035
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AA seq
657 aa
AA seq
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MSMSGADFNGVGEDPRVFRNICRDRILKDMLKPDKDKETKSSWKVLIMDKFTVRIMGYAC
KMAEITDAGVSLVEDLFKRREPMPSMDVIYFVQPLKENVIMLLSDMSGRCPLYRKAYIFF
SSPIPKDLVTYIKNDSSVIPRIGALREMNLEFFAIDMQGFVTDHDMALTDLYGANENNSK
KFNDTISTMACRIATTFASLKEFPTVRYRAPKSADPSTAPKFDMVPKWLATATWEIVSKY
KSTIPEFPQKETCELLVLDRPIDQIAPVIHEWTYDAMCHDLLEMDGNKYIYEVSKGDAEP
EKKEALLEDQDPLWIELRHTHIADASERLYEKMNTFVSKNKAAQLHSRDGGEISTTDLQK
IVQALPQYGEQVDKLTLHIDIAGKINRCIREFGLRDLGQLEQDLVFGDAGAKEVINMLRS
KQNLSEENKLRLLIIYAIVCPDKFEGDKGDKLMQLAKLPSDDMKAINSLRYLVSSDAKKA
ARAGGFSLKFDAQKKKNTGVRTERQDGEEGWALSRFFPLIEELVEKLSKGELPLNEYPSL
SQPSSTSQGTAESGSAPKPAQNPQPMSRRSRRTPQWAKGRNSDDGQSSDSSVLRHASGDF
KRLGNRIFVFIVGGATRSELRVAHKLTMKLKREIVLGSSSIDNPPQFISKLKALGPS
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtcgggggcggacttcaacggcgtgggcgaggaccccagggtcttccgcaac
atctgccgcgaccggatactcaaggatatgctcaagcccgacaaggacaaggagaccaag
agctcgtggaaggttcttatcatggataaatttacggttagaatcatgggttatgcttgc
aagatggcagaaatcacagatgcaggggtttcattggtggaagatttgttcaagcgaagg
gagccgatgccttcaatggatgtgatctactttgtacaaccactgaaagaaaatgttata
atgcttctatccgacatgtctgggagatgtccgctgtacaggaaggcatacatcttcttc
agctcaccaattcccaaggacctggtgacttacattaagaatgacagcagtgtcatacca
cgcattggtgcactaagagagatgaatttggagttttttgctattgacatgcaggggttt
gtaactgaccatgacatggcactgactgacttatatggtgcaaatgagaataattcaaaa
aaattcaacgacaccataagtactatggcttgccgcatagctaccacatttgcatcgttg
aaggaatttcctactgtgcgctatcgagcacccaaaagtgcagacccatcaacagcacct
aaatttgacatggtaccaaaatggctggctaccgctacttgggaaatcgtgtcaaaatat
aagtcaacaattccagaatttccccagaaggagacatgtgaattgcttgttctggacaga
cctatagatcagatagcacctgttattcatgaatggacctatgacgcaatgtgccatgat
ctactcgaaatggatggcaacaaatacatatacgaggtatcaaaaggggatgcggaacct
gaaaagaaggaggctttattggaggatcaagatcctctctggatagagcttcgccatact
cacatagctgatgccagtgagaggttgtatgagaagatgaacacctttgtttcaaagaat
aaagcagcacaacttcattcaagagatggtggtgaaatctcaaccacggatctgcaaaag
attgttcaagctttgccacagtatggtgagcaagttgataaattgaccctccatatagat
attgcaggaaaaatcaataggtgcatcagggagttcgggctccgtgatcttgggcagttg
gagcaggatctggtttttggagatgcaggagcaaaggaggtgatcaatatgctcaggtca
aagcagaatttgagtgaagaaaacaaattgagattgttgatcatatatgcaattgtatgt
cccgacaagtttgaaggtgacaaaggggacaagttgatgcagctagcaaaactgccatcg
gatgatatgaaggccataaacagcttaagatacttagttagttcagatgcaaaaaaggca
gcacgggctggcggtttctctctcaaatttgatgcccaaaagaaaaaaaatactggtgtt
cggacagagcggcaggatggtgaggaaggctgggcgttatcacgttttttcccacttata
gaggaactggtcgagaaactgagcaaaggtgaattgcctctaaacgaatacccatcttta
agtcaaccaagttctacttctcaagggaccgcagaaagtggatcggcgccaaaaccagca
caaaatccacagcccatgtctaggagatcacggcgcacaccgcagtgggctaagggccgt
aactctgatgatggtcaatcaagcgactcttccgtgttgagacacgcatcaggtgatttc
aagaggctaggcaaccgaatatttgtcttcatagttggtggagcaacccgatctgaacta
agggtggcgcacaagcttaccatgaagttgaagagagaaatcgtcctcgggtcctctagc
atcgataatcctccacagtttatttcgaagttgaaggcgctaggaccatcctag
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