Hordeum vulgare subsp. vulgare (domesticated barley): 123441303
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Entry
123441303 CDS
T11213
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123441303
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123441303
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123441303
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123441303
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
123441303
NCBI-ProteinID:
XP_044973719
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Position
3H:complement(10846711..10848153)
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AA seq
358 aa
AA seq
DB search
MAGQDKRCLPSMPACNGEHGGKKARYQAVVKQEPQQEEDVEEEREEGELTSHGGSPGVAA
ATEALVGAAPAPAPAQIDVRMDVALLHCQACFLPLKPRVFKCETGHVVCGYCRGAHGEAC
GRADTPCPELDAVVGATKVPCAYRDLGCDRFVVYHGAAEHKRACPWMPCSCPQPGCAFLG
PPAALLDHCAAEHSRPIIQVRYGRPWTLSLPLAQRWHVVVGQEDRSVFLVSLAELGVAAT
AVSLLCVRPDGAAALPAAPHFWCKLSVEHPGGDKDMMVMMASAVGSSPLSAGPPVPGQGM
FLAVPHELMSGDVLAISVRIDHLQPPPATATVVAAVAARAPPPPHANAIARTTARRLQ
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggccgggcaggacaagaggtgtttgccgtcgatgccggcgtgcaacggcgagcacggc
ggcaagaaggcgcggtaccaggccgtggtgaagcaggagccgcagcaggaggaggacgtg
gaggaggagcgggaggagggcgagctgacgtcccatggcggcagcccgggagtggcggct
gcgacggaggccctggtcggggcggctcctgcgcccgcgccggcgcagatcgacgtgagg
atggacgtggcgctgctccactgccaggcctgcttcctccccctcaagccccgcgtgttc
aagtgcgagaccgggcacgtggtgtgcggctactgccgcggcgcgcacggcgaggcctgc
ggccgcgccgacacgccctgccccgagctcgacgccgtcgtgggcgccaccaaggtgccg
tgcgcgtacagggacttgggctgcgaccggttcgtcgtgtaccacggcgcggcggagcac
aagcgcgcgtgcccctggatgccctgctcgtgcccgcagccgggctgcgccttcctcggc
cccccggcggcgctcctcgaccactgcgcggccgagcactcccggcccatcatccaggtg
cgctacggccggccgtggaccctcagcctgccgctggcgcagcggtggcacgtggtggtc
ggccaggaggaccgtagcgtcttcctcgtgtccctggccgagttgggcgtcgcggccacc
gcagtgtcgctgctctgcgtcaggcccgacggcgccgcggcgctgcccgcggcgccccac
ttctggtgcaagctctcggtggagcacccgggcggcgacaaggacatgatggtcatgatg
gcttccgccgtgggcagcagccccctgtccgccggcccgccggtgcccgggcaggggatg
ttcttggcggtgccgcacgagttgatgtccggcgacgtgctcgccatcagcgtccgcatt
gatcatctccagcctcctcctgcaactgccactgttgttgctgctgtcgcggccagggca
ccaccaccaccacatgccaatgccattgccaggacaacagcgaggaggctccagtga
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