Hordeum vulgare subsp. vulgare (domesticated barley): 123441455
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Entry
123441455 CDS
T11213
Name
(RefSeq) putative E3 ubiquitin-protein ligase SINA-like 6
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
123441455
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123441455
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123441455
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
123441455
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_ZnF
Sina_RING
ZnF_RZ-type
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
123441455
NCBI-ProteinID:
XP_044973820
UniProt:
A0A8I6XQQ4
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All DBs
Position
3H:complement(39914732..39915785)
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AA seq
302 aa
AA seq
DB search
MQKRSAKKGGKGSGGPKKDMGCSSGSVPKKARTTRKSPTKCGAEHEEEEEEMEIVNVFSH
EMDSLECDICFLPFESRVYSCKNGHAACAACCINMERECPSCREPIGDFRCRATEKILAG
MTRPCRFKKHGCTETVRYTEARAHEEDACRFAPYRCPFDGCAYRGLMLYDHIQDDHAAGG
GVTSAMGLLRRMTVTLQKAAPFLALMHRDGESVFLLLNRGGDDLTGRRLSVICICPYPLE
EDEEIETEYTMVVKGDVAASLSLTATVPFVRRLQGYKANAFIIVPKEFWDSSGTVTVTLQ
FS
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaaggagcgccaagaaaggcggcaagggcagcggcggaccaaagaaggacatg
ggttgcagcagtggcagcgtaccaaagaaggcgagaaccactaggaaatcaccaaccaag
tgcggcgctgagcatgaagaggaggaagaagagatggagatcgtcaacgtcttctcccac
gagatggatagcctggaatgcgacatctgctttctcccattcgagtcccgagtttactcg
tgcaagaacgggcacgcggcgtgcgctgcctgctgcatcaacatggaacgcgagtgcccc
agctgcagagagcccatcggcgacttccgctgccgggcaacggagaagatcctcgccggc
atgaccaggccatgccggttcaagaagcacggctgcacggagaccgtccgctacacggag
gcgcgcgcccacgaggaggacgcatgccgcttcgcgccgtaccgctgcccgttcgacggc
tgcgcctaccgcggtctgatgctctacgaccacatccaggacgaccatgcggctggcggc
ggcgtcacctccgccatgggtctgctccggcggatgacagtaacgctgcagaaggcggcg
cccttcctcgcgctcatgcaccgcgacggggagagtgtcttcctcctgctcaaccgcggc
ggcgacgacctcactgggcgccggctgtcggtgatttgcatctgcccttacccgttggag
gaggacgaggagatagagacggagtacacgatggttgtgaagggcgacgtggcagcgtcg
ctgtcgctgacggcgaccgtgccgtttgtccgccggctgcaggggtacaaggccaatgcg
ttcatcatcgtacccaaggaattctgggattcgtcgggcaccgtcaccgtcaccctgcag
ttctcttga
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