Hordeum vulgare subsp. vulgare (domesticated barley): 123441665
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Entry
123441665 CDS
T11213
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 17
KO
K14806
ATP-dependent RNA helicase DDX31/DBP7 [EC:
5.6.2.7
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
hvg01009
]
123441665
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hvg03009
]
123441665
Enzymes [BR:
hvg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
123441665
Protein phosphatases and associated proteins [BR:
hvg01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
123441665
Ribosome biogenesis [BR:
hvg03009
]
Eukaryotic type
Pre-60S particles
Helicases
123441665
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
ResIII
UvrD-helicase
ERCC3_RAD25_C
DUF7533
Motif
Other DBs
NCBI-GeneID:
123441665
NCBI-ProteinID:
XP_044973923
UniProt:
A0A8I6WGM4
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All DBs
Position
1H:9608084..9611433
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AA seq
608 aa
AA seq
DB search
MAAKRKLGRPPPAATPAAPKAKEDDAEGLFSSRSFADLGLHPTLCAHLQDKMGFQGPTRI
QAQAIPVAMSGQHLLVKAATGTGKTLAYLAPIVHLLQMREPRVERTHGTFALVIVPTREL
CLQVYGIAQQLVHRFHWLVPGYVMGGESRSKEKARLRKGISILIATPGRLLDHLQHTSSF
VYSNLRWIVFDEADSILELGFGKAVEDILGLLGSRNDASDENKSKTDPMQRQNLLLSATL
NEKVNRLANISLKNPVMIGLDEQKKPSERSSALGKKHTSLLSDDEEEIPDKHNNIVEPAV
DDFKLPAQLVQRYVKVSCGSRLAVLLTILKSQFEKQVSQKVVVFMSTCDAVDFHHTVLSQ
LEWSRGLALDTDKKQKFLGCKVFRLHGNMDQEDRKKSYLGFSSEKSAILVCTDVAARGLD
IPKVRCIIQYDSPGEASEYVHRVGRTARIGEKGEALLFLQPVEIDYLRDLELHGVSLTEY
PFQKVLDGFPVNGEKPLKRKPISLDMHPWILSVQRTLENYVASEATTNKLARDAFCSWLR
AYTAHRGELKKIFMVKKLHLGHVARSFGLKEQPSLVGRSHQVQLKKRKKEQKREGQGPTK
RRKFPTKK
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaagaggaagctcggcaggccgccgccggcggccaccccagcggcgccgaag
gccaaggaggacgacgcggaggggctcttctcctcgcgctccttcgccgacctcggcctc
caccccaccctctgcgcccacctccaagacaagatgggtttccaggggccgacgcggatc
caggcccaggcgatccccgtcgccatgtccgggcagcacctgctcgtgaaggcggccacc
ggcaccggcaagacgctcgcgtacctcgcgcccatcgtccaccttctccagatgagggag
cctcgtgtcgagagaactcatgggaccttcgcgttggtaattgttccgacgcgagagctg
tgcctccaggtttatgggattgcgcagcagttggtgcatcgttttcactggcttgtccct
gggtatgtaatgggtggtgagagtagatcaaaagagaaagcaagactacggaaaggaata
tcaatcctcattgccactcctgggcgccttctggaccacttgcagcatacttcatcattt
gtttattcaaatttgcgctggatagttttcgatgaagctgacagcattcttgagcttggt
tttggaaaagcagtcgaggatattttagggctcttgggttccagaaatgatgcttctgat
gagaataaaagcaaaaccgaccctatgcaaaggcaaaaccttctcttatcagcaactctg
aacgaaaaggtgaaccgcttagccaacattagtttgaagaacccagtgatgattggactt
gacgaacaaaagaagccttctgagaggtccagtgctctagggaagaagcacacttcctta
ttatctgatgatgaggaggaaatacccgacaagcacaacaatatagtggaacctgcggtt
gatgattttaagcttcctgcacaattggttcaaagatatgttaaagtttcatgtggttcg
aggcttgcggttcttcttaccattctgaaatctcaattcgaaaaacaagtgtcccagaag
gttgttgttttcatgtcaacatgtgacgctgtagatttccaccacactgtactcagccag
cttgagtggagccgtggcctcgcattagacacagataagaagcaaaaatttcttggctgc
aaagtgttccgtttacatggtaacatggaccaggaagaccgcaaaaaatcgtacttggga
ttcagttctgaaaaatctgcaatccttgtatgtactgatgttgctgctagaggcttggac
attcccaaagttaggtgcatcatacagtatgattcacctggagaggcttctgaatatgtt
cacagggttggaagaactgcaaggattggtgaaaagggggaggccctcctgtttctccaa
ccggttgaaatcgactacttgagagacctagagctgcatggtgtatctctgacagaatac
cccttccagaaggtgctagacggtttccctgtaaatggagagaagcctctcaagaggaag
ccaatatctttggatatgcatccgtggatactgtctgtacagcgaactctggaaaattac
gtcgcatccgaggccacaacaaataagcttgccagggatgccttctgttcctggcttcgc
gcttacaccgcccaccgaggcgagctgaagaaaatcttcatggtgaagaagctccacctg
ggacatgtggcgagaagcttcgggttgaaggagcaaccctcgttggtcgggaggtcgcac
caggtgcaactcaagaagaggaagaaagaacagaaacgcgaaggacaaggaccgaccaaa
cggagaaaattccccactaagaagtga
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