Hordeum vulgare subsp. vulgare (domesticated barley): 123442188
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Entry
123442188 CDS
T11213
Name
(RefSeq) LOW QUALITY PROTEIN: probable disease resistance protein At5g63020
KO
K03094
S-phase kinase-associated protein 1
Organism
hvg
Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03083
Polycomb repressive complex
hvg04120
Ubiquitin mediated proteolysis
hvg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
123442188
04120 Ubiquitin mediated proteolysis
123442188
09126 Chromosome
03083 Polycomb repressive complex
123442188
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123442188
04121 Ubiquitin system [BR:
hvg04121
]
123442188
03036 Chromosome and associated proteins [BR:
hvg03036
]
123442188
Membrane trafficking [BR:
hvg04131
]
Endosome - Lysosome transport
Acidification regulators
RAVE complex
123442188
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Adaptor protein
123442188
Cul7 complex
123442188
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
123442188
Centromeric chromatin formation proteins
Kinetochore proteins
CBF3 complex
123442188
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NB-ARC
LRR_14
LRR_8
AAA_22
LRR_4
LRR_RPS2
ATPase_2
WHD_DRP
AAA_16
PIF1
Motif
Other DBs
NCBI-GeneID:
123442188
NCBI-ProteinID:
XP_044974186
LinkDB
All DBs
Position
3H:599068629..599074408
Genome browser
AA seq
1337 aa
AA seq
DB search
MDLPSTPAHFLLVVYIILNCVTLLFYDELLIQYQIKPALLEATSRNRRSTAIFLGKLITG
TCKLSCNILIVRLSKLVTTMPANLGSWFGPTVSTVITPLKDVFLTHAMYCFSTGKNVRDH
DRATKTLIGIQKGIQGEIEAGIQNGLIGTNEAKFWLERANKAISEEQRNHQRYDSRCRIF
ACCSLNCWSNYKIGKRAAQKLPDVDACIKNIPRTVTDNQPPPFVIDIPVQFAQLPSHEKV
LLDAQKYIDDDRVGMIGLWGPDGVENTYLLKKINNSFVGDSPYFVIFVTASRECSVQNIQ
DQIIQRLDIGQDDGVSTKTTSIAKLLRTRNFLVLVDDLHEKLDLLEVGIPYPLGTVGEFK
RKVVLTSQSEIVHSRMGVNEYIEVPGLGETEALELFKHNFDQEDIYYDPHIGPLVNDLIK
ELKGIPSDLIEFGKQMQGKRGPEQWEDVIRSVKKWNLQKKDPSSTGRTLRNLEDATNNLL
ARSNDVRLRIVAAERQCMRPTNEVNRWLEKVSAINSDIQVIFDGYKLNKDVIVEASEKLT
EVQECLSACPNKNNITFEYAPAPAQEIPGPSMSDKNRNLQEALQFIKNDPVGMIGIWGPG
GVGKTYLLRNINNSFGDMSLHVIFVTASRGCSVRTIQGDILKKLGMAECGDLESQRQLIY
EFLXVVLLDDLWEQIDLQSVGVPYPLGNVDQVKRKVVLTTRLRKVCGEMEVRKELKVACL
QEDDAWQLFTEKVSQETLSSSPRIEALAKELVKELKGLPLALIVIGKAMYPKTDPIEWEY
AIQHMQRSCCDKDNPLSIENVFGQLKFSYDNIRNDTLRHCFLTCALWPENWEIIKAELAQ
CWIGLGLVDECDIQSAYTKAYSLIGDLRDACLLENWRNWYGFVKVHDVIRDMALWISCGC
GEANNKWFVRAEAGAEENISISWSKPEYISLMLNGMKKLPPFRFDHHPMKLRVLCLQNNY
FDGSIAETVMNFSSLTYLDLRTNLLKNIPEELCSLANLEYFDLSHNPHICELPYCFRNLS
KLKFLYLLCTSVRRIPEEVISNLKALQVIELRTCRAYVGGGPVNFIPKIFEELGTLDHFK
SAGIDADGFDEYASLREAAKLPIRSLRLGSLRETHEFCLSDILSIRFARRTLYELDIIQS
NMEQIIVRDESNYYFGALNKLLMWFLVNLRGIAWLGRSPASIFPRLTCLDVNSCSKLENL
SWVMYLPCLEQLEARFCNIMKEAFPGTGHHGEIMSTDQESSMKSNGTFSCLKYLRLSDNP
KLITICNPDVTFPSLEQLVLTKSPELIRLPFQMHSLPLKLQELQFDDVECWDRLECEEGV
KSFLQPSLKFGYVSEIP
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atggatctcccatccactcctgcacactttcttctggtggtttacataatattgaactgt
gttacacttctcttctatgatgaattgttgatacaataccaaataaaacctgctcttctt
gaagcaacttctaggaacaggagatccacagccatttttcttggcaaattaataactggg
acatgcaaattatcttgcaatattctgattgtgcgtttatctaaattggtgacaacaatg
ccagccaacttgggtagttggtttggtcctactgttagcaccgtcataactccactcaaa
gatgttttcctcacacatgcaatgtattgcttcagcactggcaaaaatgtgagagatcat
gatagggctactaagactttgattggcatacagaagggtattcaaggcgagatcgaagct
ggtatccagaacgggttgataggaacaaatgaagcaaaattttggctggaaagggcaaat
aaagctatatctgaagaacagagaaaccatcaacgatatgacagtagatgcagaattttt
gcttgttgctccctaaattgctggtcaaactacaaaattggtaagagagcagctcagaag
ctgcctgatgtggatgcatgtatcaaaaatatacccaggactgttacagacaatcaaccg
ccaccttttgtcatagatatccctgtccaatttgctcaacttccaagtcatgagaaggtc
ctcttggatgctcagaaatatattgatgatgatcgagtcggaatgattggattatggggc
ccagatggagttgagaacacatatcttctcaagaagatcaacaattcctttgttggagac
tctccatattttgttatctttgtgacagcctccagagaatgctcagtacagaatattcaa
gatcaaatcatacagcggcttgacataggacaggatgatggtgtatcaactaaaaccacc
agcatagctaaactactcaggacaagaaactttctcgtgttggtggatgaccttcatgag
aagctagatcttctagaagttggcattccatatcctctcggaactgtgggtgaattcaag
aggaaagtggtactcacctcacaatcagaaattgtacacagtcgaatgggtgtgaatgaa
tatatagaagtgcctggtttgggagagactgaagcactagagttatttaaacacaatttt
gatcaggaagatatttattatgatccccacatcgggcccttggtgaatgatctcataaag
gaactaaaaggtataccatcagacttgatagaatttgggaagcaaatgcaaggtaaaaga
ggtccagagcaatgggaagatgtcattcgttcagtaaagaaatggaaccttcaaaagaaa
gacccaagttcaacaggaaggactttgagaaatctggaggatgccaccaacaacttgctt
gcgaggagcaatgatgtccgtctaaggattgtggctgctgagcgacagtgcatgagaccc
acgaatgaagtgaacagatggctggaaaaggtttctgcgatcaattctgacatacaagtt
atctttgacggctacaagttgaataaagatgttattgtggaggcatctgagaagcttact
gaggtccaagaatgtctcagtgcttgtcccaataaaaacaatattacatttgagtatgcg
ccagcacctgcccaagagatacctggtccatcaatgtctgacaagaaccgtaatcttcaa
gaggctctccagttcattaagaatgaccctgtgggaatgattggaatatggggcccaggt
ggagtggggaaaacatatcttctgcgaaatatcaacaactcatttggggacatgtccttg
catgttatttttgtgacggcctcaaggggttgttcagtgaggacgattcaaggagatatt
ctaaagaagcttggaatggcagaatgtggtgatttggaatcacaacgccaactcatctat
gaattcctgnnagttgtactattggatgacctttgggagcaaattgatctacaatcagtt
ggcgtaccatatccccttggaaatgtagatcaggtcaagagaaaagtggtgcttacaaca
agattaagaaaagtttgtggtgaaatggaggtgaggaaagagttaaaagtcgcttgtcta
caggaggatgatgcatggcaattattcacagagaaggttagtcaggaaactctgtcttca
agtcctcgtatcgaagcccttgcaaaagaactagttaaagaattgaagggcttgccatta
gctttgatagttatcgggaaggcaatgtatccaaaaactgatccaattgaatgggaatat
gccatccaacatatgcaacggtcatgctgtgacaaagataatcccctgtccatagaaaat
gtttttggacaactcaagtttagttacgataatatacggaatgacaccttgagacattgt
ttcttaacttgcgcactgtggccagagaattgggagattattaaagctgaactcgctcaa
tgctggataggcttaggtctagtggatgagtgtgatattcaaagtgcctacacaaaggca
tatagtctaataggcgaccttagagatgcatgtctgttagagaactggagaaattggtat
ggttttgttaaagtgcacgatgttattcgtgatatggctttatggatctcgtgtggttgt
ggagaggccaataacaagtggtttgtccgtgccgaagctggtgcagaagaaaatattagc
atctcttggagcaaacctgagtacatttcactgatgttgaatggaatgaagaaacttcct
ccctttagatttgatcatcaccccatgaaattgagggtgttatgccttcaaaataattac
tttgatggaagcatagctgaaacggtcatgaatttcagttcactaacatatctggatttg
aggacaaaccttctcaagaacatacccgaagaattatgttccttggcaaacttggagtac
tttgatttgtcacataatccccacatatgcgaattgccttactgctttcgaaatctctct
aaactcaagttcttgtacctgctgtgcactagcgtacgaagaataccagaggaggtcata
tctaatcttaaagcactacaagtaatagagttgaggacttgccgagcatatgttggagga
gggcccgtcaactttatccctaaaatatttgaagagttgggtaccctagatcacttcaaa
tcagctggaattgacgctgatggttttgatgagtatgcatcactaagagaagctgctaaa
ctccccattaggtctttaagattggggagtctcagagaaacacatgagttctgcctctct
gacattctttcaattagatttgcacgcaggactttgtatgaactggatattatacaaagt
aacatggagcagataattgtaagagacgagtcaaactactattttggtgctctgaataag
ctcctcatgtggtttttggtaaacttgagagggatagcatggctgggcagatctccagca
tccatttttccaagactcacttgtttggatgtgaatagctgctccaagctagagaacctc
tcttgggtgatgtacttgccttgccttgaacaacttgaggcacgtttctgcaacattatg
aaggaagcgtttcctgggacagggcaccatggtgaaataatgagcaccgatcaagaaagt
tcaatgaaatcaaacggtacattttcttgcctgaaatatctgcgcctttcagataaccct
aagttgatcaccatctgcaatcccgatgtgacgttcccgtccctggagcagctggtgctc
acaaaatctccagagttgatcaggctccctttccagatgcacagcttgccgctaaagctg
caggagctacagtttgatgatgttgaatgctgggacagattggaatgtgaagaaggtgtc
aaatctttcctgcaaccctctcttaaatttggctatgtgagtgaaataccatga
DBGET
integrated database retrieval system
