Hordeum vulgare subsp. vulgare (domesticated barley): 123442221
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Entry
123442221 CDS
T11213
Name
(RefSeq) E3 ubiquitin-protein ligase RNF170-like
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hvg04121
]
123442221
Enzymes [BR:
hvg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
123442221
Ubiquitin system [BR:
hvg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
123442221
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
zf-RING_2
zf-C3HC4_3
zf-C3HC4
zf-RING_5
RING_XB3-XBAT31
zf-C3HC4_2
zf-ANAPC11
zf-RING_UBOX
TRAF3_RING
zf-rbx1
Motif
Other DBs
NCBI-GeneID:
123442221
NCBI-ProteinID:
XP_044974207
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All DBs
Position
3H:604964756..604968973
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AA seq
195 aa
AA seq
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MAPASASASASAAPPLDARCAVCRGVDISLPHQANCSHWFCGHCIVGVWLHGSVLRPSSC
PVCRRPITLLVPSQVASLLRDEPEIAPVMNRIEQYNGRFAGVPHSMIQWLLDQPFYMRRM
LTELRDTCQGPPSNFKIQVALAAAIALLYLASPIDLFPEAFLGYRGLLDDILVLIIAYVY
ISAAYRDILVARHAA
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggccccggcctctgcctccgcctccgcctcggcggcccctcccctcgacgcgcgctgc
gccgtgtgccgcggcgtcgacatctccctcccccaccaggccaactgctcccactggttc
tgcgggcattgcattgtgggggtgtggctacatggatctgtccttcgcccatccagttgc
cctgtttgtcgtcgccccataacgctgctggtaccttctcaagttgcttccctgctgcgt
gatgagccagagattgctcctgtcatgaaccgaattgagcagtacaatggccgttttgct
ggagtacctcacagtatgattcagtggttgctggaccagcccttttacatgaggaggatg
ctgacagaactcagagacacatgccaaggacctccctccaacttcaaaatccaagtcgca
ttggcagcagccatcgctctgctgtacctcgcgagccctatagaccttttccctgaagct
ttcctggggtaccgtggtctgctggacgacatcctggtgctcatcatcgcgtacgtctac
atctccgccgcctaccgggacatcctcgttgcccgacacgctgcgtga
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