Hordeum vulgare subsp. vulgare (domesticated barley): 123442354
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Entry
123442354 CDS
T11213
Name
(RefSeq) uncharacterized protein LOC123442354
KO
K17302
coatomer subunit beta'
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
hvg04131
]
123442354
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hvg04147
]
123442354
Membrane trafficking [BR:
hvg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
123442354
Exosome [BR:
hvg04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
123442354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
WD40
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_EIPR1
WDR55
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_DCAF4
Beta-prop_TEP1_2nd
Beta-prop_Vps41
Beta-prop_SPT8
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
ABC1
Beta-prop_LRRK2
Motif
Other DBs
NCBI-GeneID:
123442354
NCBI-ProteinID:
XP_044974304
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All DBs
Position
3H:complement(1653606..1674754)
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AA seq
845 aa
AA seq
DB search
MADGPRRVPFHLLEIMTDNFSPHLVIGHGSYGKVYLGTRDGQKIAVKILRDVPGHDDTEF
DKEFDILVKLQHQNIVQLVGYCHETGREYSSYEETKVLADDRKRALCFEFMEKGSLSRHL
SAESTGHDWHTRYAMIKGICNGLKYLHEGVKPPIFHLDLKPANILLDQNMIPKIADFGLS
RFFNEEKSYSTNDLIGTLGYLPPECIPHGIISNKFDIFSLGVVVIKIIAGPEGYSRSAET
TSDQFTETVHDNWRDRLQLTASGDLLESYSEQVKTCIEIALSCLKADRQERPTIGDIVNK
LTGTETPENYHEALIDEVRSTIALSCLEDDRQKRPTRGDIVNKLTGTGTLENYDEAKWQK
RLLIDNKFTGRETIKNYLEALIDEMSTNLIDVHPLQLHFSFRPNKCISCVFHVTNNMNDQ
HLSVRCVPKHEEATPRYYACRSRIACVVPPRSTHTFVVTMVQQEQPPAIMDVLDMVVETI
LGEVKLRSLSDSFDKHFEDAREEKSCGFREVTLKAVCATTSKTTTSEVLMGDDRLWSMDV
HPTEPWILAGYARRLVIWNYKTQTRMMECGFFPGRADASYSVVVNTVRFIAKSKEQLFVV
GDDYGYIYVHDSMTMKELKKFKAHGSSVTSFAVHPTQPFVLSASWDKLIKLWDYDKGWEC
IQTFTGHSHWVWQVKFNPHDAANTFASASGDGTVKIWSISSPMHVTSLDCEGGQGCVDYY
PTAAGGDQQHYMVAGSIYSGKTSIWDLRTQTCIREIKGLQSLCEVGVIDCHPDRPTLLLT
ASEDYGVSLVDSTTYRCEKTIHFGLDEVRCFAYIKSIRSLAIAHHFGIAIVGIDEFSKDG
LPPAR
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgggccaagacgtgtgccattccatttactggaaattatgacagataatttc
tctccacacctcgtaattggccacggttcgtatggaaaagtttacctggggacgcgggat
ggtcaaaaaattgctgtaaagattcttcgcgacgtgccaggacatgacgatacggaattt
gataaggaatttgacatccttgtaaaactgcaacaccagaacatcgtgcagttagttggt
tattgccatgaaaccggacgagaatactcgtcgtacgaggaaacgaaggttcttgctgat
gacagaaagagggcgctttgctttgagtttatggaaaagggaagccttagccgccatctt
tccgccgagtcaactggacatgattggcacacgcgctacgctatgattaagggtatttgc
aatggtttaaagtaccttcacgagggggtgaagcctcctatttttcatttggatctaaaa
ccagccaacatattgctggatcagaacatgatcccgaaaatcgcagattttggattgtcg
agattcttcaatgaagaaaaatcttatagcactaatgatcttataggaacacttgggtac
ttgccaccggagtgtatacctcatggaataatctcaaataaatttgacatattcagcctg
ggtgttgtggttataaagataattgcaggacctgaaggctactccagaagtgctgaaacg
acctccgatcaattcactgagactgtgcatgataattggagggataggctacaattaacg
gcgtcaggggatttgttggaatcgtattctgagcaagtaaagacatgtatcgaaattgct
ctaagctgtttgaaggccgatcggcaggaaaggccaactataggggatattgttaataag
cttactgggacagagacaccagaaaactatcatgaggcattaattgacgaggtacgatca
acaattgctctaagctgtttggaggacgatcggcagaaaaggccaactagaggggatatt
gttaataagcttactgggacagggacactagaaaactatgatgaagccaagtggcagaaa
aggctattaattgataataagtttactgggagagagacaataaaaaactatcttgaggca
ttaattgatgagatgagcactaacttgatagatgtccatcccctccagctccacttctct
ttccggccaaacaagtgtatctcctgcgtatttcacgtaactaacaacatgaatgatcag
catctgtctgtgaggtgtgtgccgaaacacgaggaggcaacacctcgctactacgcctgt
cggagccgcatcgcctgtgttgtgccaccaaggtccacgcacaccttcgttgtaacgatg
gtacaacaagagcagccgccggccatcatggacgtgcttgacatggtcgtagagactatc
ctgggggaagtaaagctgcgttcgttgtctgattcgtttgacaagcattttgaggatgct
agagaagaaaagagctgtggttttcgtgaggtgaccctaaaggctgtctgtgcaacaacg
agcaagaccacgacatctgaggtcttgatgggtgatgatcgactatggtcaatggatgtg
caccccacagagccttggattttggcaggctatgcgagacgacttgtgatttggaactac
aaaacccagacaagaatgatggagtgtggattctttcctgggcgggcagatgcctcctac
agtgtggttgttaacaccgttaggtttatagcaaagtcgaaggagcaattgttcgtggtg
ggtgatgactatgggtacatctacgtgcatgactctatgacaatgaaggaactcaagaaa
ttcaaagctcacggcagtagtgtcacatcattcgccgttcatccgactcaaccatttgtg
ctgtcggcatcttgggacaaactgatcaagctctgggactatgacaaggggtgggagtgc
atccagacattcactgggcactcgcactgggtgtggcaagtcaagtttaatccgcatgac
gccgccaacacttttgccagtgcttcaggtgacggcacggtcaagatctggagtatctct
tctcccatgcatgtcaccagcctcgactgcgaaggtggacagggatgtgttgattactat
cccacggccgcgggtggtgatcagcagcactacatggttgcaggatcaatctattccggg
aagacatcgatctgggatttgcgaacacagacatgtatccgtgaaatcaaggggctccaa
tcattatgcgaagttggtgtgatcgattgccacccggatcgtccaacattgttgcttacc
gcatcagaggactatggtgtttctctcgtcgactccacaacctacaggtgtgagaaaacg
atccatttcggtctcgacgaggttagatgttttgcatacatcaagagcataagaagcctc
gccattgcacatcacttcggcattgcaatcgtgggtatcgatgaattttccaaggacgga
ctgcctcctgcaaggtaa
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