KEGG   Hordeum vulgare subsp. vulgare (domesticated barley): 123442363
Entry
123442363         CDS       T11213                                 
Name
(RefSeq) protein decapping 5-like
  KO
K18749  protein LSM14
Organism
hvg  Hordeum vulgare subsp. vulgare (domesticated barley)
Brite
KEGG Orthology (KO) [BR:hvg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hvg03019]
    123442363
Messenger RNA biogenesis [BR:hvg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     123442363
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 123442363
NCBI-ProteinID: XP_044974314
UniProt: A0A8I6X1I1
LinkDB
Position
3H:2185977..2191878
AA seq 660 aa
MAAEAPPPPPSSSSSAPARQAPAGAASPETYLGSLISLTSKSEIRYEGVLYNINTEESSI
GLRNVRSFGTEGRKKDGIQIPASDKVYEYILFRGSDIKDLQVKSSPPPPQPQPAPLHNDP
AIIQSHYPPSSTTSSLQSAGGAALPDLSSQPAQYGFQRPNFPSNIPLYQPGNNPWGSSGQ
PPAGNASALSVPPMYWQGYYTPPGGLPSHLQQPTMLQPTPGLSAPQTFQYPGLNPSLPSG
PPLLQPSVTGQGPSSSATPATTAPSASLLGPETSKPLLPNMVPLFTPPVPSHGASLPVAS
QPISMTETSATASQNLNSLVSSKTPAVNSGSTLLYQTAPQAISSTSASSSLAGLEIPAPL
LASSGQLLQNAPSMLSSSQSMQTPLQMSNNITKPADPKTRVAEPLLPDPPTRALPENNEP
ILPLPKQTPQRYNGAGSQGHHNYRGRGRGRGSALSQASTKFTEEFDFMAMNEKFNKDEVW
GHLGKKSQSRDKDGDQGDDVFDEDLEYEETDNPELDVKPVYVKDDFFDSLSGGTFGRGGQ
NGRPRFSELRKMDTETFGDFPRHRQPYRGGGRGYRGGGGRSRGSYYGGRGDYGNIGRGGG
QENYYGGGRGGYGNMGRGGGGGGGQDNYYGGGGGRGGYGRGGGQEDSYPQRGGSGSYGRG
NT seq 1983 nt   +upstreamnt  +downstreamnt
atggcggcggaagcgcctccaccaccgccgtcctcctcctcctccgcccccgcgcgccag
gcgccggccggggcggcgtccccggagacgtacctcgggagcctcatcagcctcacctcc
aagagcgagatcaggtacgagggcgtcctctacaacatcaacaccgaggagtccagcatc
ggcctccgcaatgtgcggtcgtttggaaccgaagggcgcaagaaggacgggatacagatc
cccgctagcgacaaagtctacgagtacatcctcttccgcggaagcgatatcaaggatttg
caagttaagtcgtcgccgccgccaccacaaccacaaccggctcccctgcacaatgatcct
gccataatccagtcacattatcctccatcatcgacgacctcaagtttgcagtctgctggt
ggtgcagctttgccggacctcagctcccagccagcccaatatgggtttcagaggccaaat
ttcccgagtaacattcctctatatcagccagggaataatccatggggttcttctggtcaa
cctcccgctggaaatgcttctgctctttcagtcccgccaatgtattggcagggatactat
acgcctccaggtggccttccatctcatctgcagcaacctactatgcttcagcccacgccc
ggattatcagctccacagactttccaatatccaggactgaatccatctttaccatctggg
ccccccttgttgcaaccatctgttactggtcaaggtccttcctcaagtgccacgcctgct
acaacggcaccttctgctagcttattaggtccagaaacatcaaagcctctgctgccaaac
atggtacctctgtttactcctccggtgccgtctcatggtgcctctcttccagtagccagt
cagccaatttccatgactgaaactagtgcaacagcatcgcagaacttaaattctcttgtt
agcagtaagactcctgctgtaaattcaggctcaacactgttgtaccaaacagcaccccag
gcaatttcttcgactagtgcttcatctagtcttgctggattggagataccggcacctttg
ttggcatcatctggccagctattgcagaatgctccatccatgctttcatcatctcagtcc
atgcaaacacctttacaaatgagcaacaacatcaccaagcctgctgaccccaaaacaagg
gttgcagaaccactgctacctgatcctccgacacgcgctctgccagagaataatgagcct
atattgccattgccaaaacagacaccacaaaggtacaatggagctggttcacagggccac
cacaactataggggccgtggaaggggtagaggcagtgcgttgtcgcaagcgtcaacaaaa
tttactgaagagtttgattttatggccatgaatgagaagtttaacaaagatgaagtatgg
ggccatcttggtaagaaatctcagtctagggataaagatggcgaccaaggagatgatgta
tttgatgaagacctagagtatgaggaaacagataatccagagttagatgtcaagcctgtc
tatgtcaaggatgattttttcgattccctttctggtggaacatttggacgcggagggcaa
aacggaaggccaaggttttcagaactgaggaaaatggacacagagacttttggtgatttc
ccaaggcatcgccagccctaccgtggcggtggacgtggctaccgcgggggtggtgggcgt
tcccgtgggtcgtactacggtgggagaggagactatggaaacattggaaggggcggcggc
caggagaactactacggcggtgggaggggaggctatggaaacatgggacgtggtggtggt
ggtggtggtggacaggataactactacggtggcggtggcggcagaggaggctatgggagg
ggtggcgggcaggaagactcgtatcctcagcgtggcggcagcggttcatatggaagaggc
tga

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