Hordeum vulgare subsp. vulgare (domesticated barley): 123442674
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Entry
123442674 CDS
T11213
Name
(RefSeq) probable chromatin-remodeling complex ATPase chain
KO
K11654
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:5.6.2.-]
Organism
hvg Hordeum vulgare subsp. vulgare (domesticated barley)
Pathway
hvg03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
hvg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
123442674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvg03021
]
123442674
03036 Chromosome and associated proteins [BR:
hvg03036
]
123442674
Transcription machinery [BR:
hvg03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
NoRC (nucleolar remodeling complex)
123442674
Chromosome and associated proteins [BR:
hvg03036
]
Eukaryotic type
Chromatin remodeling factors
CHRAC complex
123442674
RSF complex
123442674
WICH complex
123442674
B-WICH complex
123442674
NORC complex
123442674
BRF complex
123442674
NuRF complex (fruit fly)
123442674
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SLIDE
Helicase_C
ResIII
HAND
DEAD
HDA2-3
Myb_DNA-binding
DBINO
CHDII_SANT-like
AAA_14
Motif
Other DBs
NCBI-GeneID:
123442674
NCBI-ProteinID:
XP_044974713
UniProt:
A0A8I6WWJ2
LinkDB
All DBs
Position
3H:22469629..22477812
Genome browser
AA seq
1145 aa
AA seq
DB search
MARPSRRRVVVVEEEEEESSVEEQQGRPDAGGSGSGGEGGAGQAEEEEIDEEEIEAVTTG
AGADDEGEEDGEGDEEEPEPTDDDEAEEDTSGNPVVGKQERARLRQLQKLKKQKIKEILQ
TQNAAIDADMNKKGQGRLKYLLQQTEIFSHFADGSKPKDKKPRGRGRPSTKRAVDEEDEE
YLEEEDALGSSGGTHLLVQPSCINGQMRDYQLAGLNWLIRLYENGINGILADEMGLGKTL
QTISLMGYLHEYRGITGPHMVVAPKSTLGNWMNEIARFCPILRAVKFLGNPEERNHIREN
LLQPGKFDVCVTSFEMAIKEKNALKRFSWRYIIIDEAHRIKNENSLLSKTMRLFSTNYRL
LITGTPLQNNLHELWSLLNFLLPEIFSSAETFDEWFQITGENDQQEVVQQLHKVLRPFLL
RRLKSDVEKGLPPKKEIILKVGMSQMQKQYYRGLLQKDLELINAGGERKRLLNIAMQLRK
CCNHPYLFQGAEPGPPYTTGDHLVETAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDIL
EDYLVYRGYQYCRIDGSTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADVVI
LYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALDALVIQQG
RLSGQKTVNKDDLLQMVRFGAEMVFSSKDSTITDEDVDRIIAKGEETKAALDAKMKKFTE
DAIKFKMDDTAELYDFDGDKEEDNADFKKIVAENLVVELPRRERIKSYNESEYFKQALRQ
AAPAKPKELRIPKMPTLHDFQFFNSQRLNELYEKEVRYLVQANQKKDTTDGEDEDQLEPF
TAEDEAEKKQLLEAGFATWAKRDFNTFIRACEKYGRNDMKSISSEMEGKSEEEVQRYAEV
FKERYKELSDYERIMKNIERGEGRINRKDVIMTAIGKKLDRYKNPWLELKVQYGTSKGKF
YTEECDRFMLCMAHKLGYGKWDELRAAFRKSPLFRFDWFVKARSAQELARRCDTLVRLIE
KENQEYDERERQARKEKRLAKKMTPTKQKMTPTKQKITPTKQKMTPTKEKKTPTKGAASK
VSDGQTAPAASSKKKMTPTKQKMTPSKRAASRVSDGETAAPATSSKKRRQSLMDDFLGSG
KKGKA
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggccgtcgaggcgccgcgtggtggtggtggaggaggaggaggaggagtcctcc
gtcgaggagcagcagggccggcccgacgccggcgggtccggatccggcggggagggggga
gcgggtcaggcggaggaggaggagatcgacgaggaggagatcgaggccgtcaccaccggc
gccggcgccgacgacgagggggaggaggacggggaaggggacgaggaggagccggagccc
accgacgacgacgaggccgaagaggacacctctggaaacccagtggtagggaagcaggaa
cgggccaggctcagacaactccagaaactgaagaagcagaagatcaaagagatattacag
acccagaatgctgccatcgatgctgacatgaacaagaaagggcaagggcggttgaagtac
ctactgcagcagacagagatattttcccactttgcagatggaagcaagcctaaagataag
aagccacgcggaaggggtcgcccttcgacaaagagggcagtagatgaggaagatgaagag
tacctagaggaggaagatgcacttggtagttcaggcggaacacacttgcttgtgcaacca
tcatgcataaatggacaaatgcgagattaccaactagctgggcttaattggctcatacgg
ctgtatgaaaacggcattaatggaatattggctgatgagatgggtcttgggaaaactctt
caaactatttcactgatgggttatctgcatgaatacagaggaataactggtcctcacatg
gttgttgcaccaaagtctactcttggtaactggatgaatgaaattgctcgtttttgtccc
attttgcgtgctgtgaaattcttgggaaatccagaagagaggaatcatataagggagaac
ttgctacagccaggaaaatttgatgtgtgtgtgaccagttttgaaatggcaatcaaagaa
aaaaatgcattgaagcgtttcagctggcgctacattattattgatgaagctcatcggata
aaaaatgagaactctcttctgtctaagacgatgaggctttttagcactaactatcgtcta
ctcatcacaggcactccactccagaacaatctccatgagctttggtctctactcaatttc
ttgctgcctgagatatttagttctgcagagacctttgatgagtggttccaaattaccggt
gaaaatgatcaacaggaggttgttcagcagcttcataaggttcttcgcccatttcttctc
cggaggcttaaatctgatgttgaaaagggtttacctccaaagaaagaaattatccttaaa
gttggaatgtctcagatgcaaaagcagtactatcgaggtctgcttcagaaagatttggag
cttattaatgctggtggtgaacgtaaaaggttgcttaacatagctatgcagctacgaaag
tgctgcaaccatccatatttattccagggggcagaaccgggcccaccttacacaactggt
gaccatcttgttgagactgcagggaaaatggttctgttagataaattgctgcccaaattg
aaggaccgcgactccagggtgcttattttctcacagatgaccaggcttttggatatcttg
gaagattatcttgtatacagagggtatcaatattgccgaatagatggaagtacaggtgga
gatgatcgtgacgcatccattgatgcatttaacaaaccaggaagtgagaagtttgttttc
ttgctttcaaccagggctggtggacttggtatcaaccttgccactgctgatgttgtgatt
ctttatgatagtgactggaatccacaagctgatcttcaagctcaagaccgtgcacatagg
ataggtcaaaagaaagaagtccaagttttccgattttgcaccgagtataccattgaggaa
aaagtgattgagagagcgtacaagaagcttgcattggatgctttggttattcaacaagga
cgattgtcagggcagaaaactgtcaataaggatgacttattgcaaatggttagatttggt
gcggaaatggtgttcagttcgaaggatagcacaataacagatgaggatgttgacagaatt
atagctaaaggagaagagacaaaagcagcgctggatgcaaaaatgaaaaaattcacagag
gatgccattaagtttaaaatggatgacactgctgaattgtatgattttgatggtgataag
gaggaagacaatgctgatttcaagaaaattgttgctgagaatttggtggtcgagctacct
aggagagaaaggataaagagttacaatgagtctgaatacttcaagcaagcacttcgccaa
gcagcaccagctaaacccaaggaactacggattccaaaaatgccaactttgcatgacttc
cagttcttcaacagtcaaaggctaaatgagttgtatgaaaaggaagtccgatacctcgtg
caagccaaccagaagaaagataccactgatggtgaagatgaagatcagttggagcctttt
actgcagaggatgaggcggagaagaaacagttattggaagcgggttttgcaacatgggct
aagagagacttcaacacatttattcgtgcatgtgagaaatatggtcgcaatgacatgaag
agcatatcctctgaaatggaagggaaatcagaagaagaggttcaacgatatgctgaagtt
ttcaaggagagatacaaggaactgagtgattatgaaagaattatgaaaaacattgaaagg
ggtgagggaaggataaatcgcaaggatgtgattatgacagccattgggaagaagttggac
cgctataagaacccatggttagagttgaaagttcagtatggcacaagcaaagggaagttc
tataccgaggaatgcgaccgttttatgctatgcatggcacacaagcttggttacgggaag
tgggatgaacttagagctgcctttcgcaagtcacccttgttccgatttgactggtttgtg
aaggcgagaagtgcgcaagagctggctaggcgatgcgacacgcttgtccgcctaattgag
aaagagaatcaagaatacgatgagcgagaaaggcaggcacggaaagagaagaggcttgct
aagaagatgacgccaacaaagcagaagatgacgccaacaaagcagaagatcactccaaca
aagcagaagatgactccaacaaaggagaagaagactccaacaaagggagctgcatcgaag
gtttcagacggccagacggctccagcggcttcatccaagaagaagatgacaccaacaaag
cagaagatgacaccttcaaagcgagccgcatccagggtttcagacggcgagacggctgct
ccagcgacttcatccaagaagcgacggcagtccctcatggacgactttctgggctcggga
aagaagggaaaggcgtag
DBGET
integrated database retrieval system
